Heatmap: Cluster_46 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00001p00092740 (SSI2)	0.11	0.22	0.14	0.22	0.18	0.0	0.02	0.0	0.01	0.01	0.84	0.9	1.0	0.9	0.5	0.74	0.26	0.69	1.0	0.48	0.3	0.31
AMTR_s00002p00249280 (PAP10)	0.15	0.01	0.0	0.0	0.09	0.0	0.02	0.03	0.02	0.01	0.37	0.18	0.56	0.29	0.12	1.0	0.21	0.27	0.26	0.05	0.2	0.14
AMTR_s00002p00271530 (AST12)	0.24	0.09	0.09	0.12	0.36	0.01	0.0	0.0	0.0	0.01	0.64	0.77	0.84	1.0	0.67	0.28	0.53	0.48	0.3	0.27	0.26	0.05
AMTR_s00003p00222840 (DTA1)	0.0	0.0	0.0	0.0	0.0	0.0	0.01	0.0	0.03	0.02	0.02	0.06	0.2	0.53	0.04	1.0	0.0	0.03	0.03	0.01	0.0	0.56
AMTR_s00003p00222870 (GA2OX1)	0.33	0.0	0.0	0.0	0.04	0.0	0.01	0.0	0.02	0.02	0.03	0.05	0.29	0.47	0.03	1.0	0.0	0.0	0.04	0.02	0.0	0.7
AMTR_s00003p00233980 (GALK)	1.0	0.73	0.39	0.18	0.28	0.01	0.21	0.04	0.73	0.48	0.84	0.72	0.77	0.64	0.49	0.52	0.57	0.79	0.53	0.33	0.57	0.43
AMTR_s00003p00246920 (OMT1)	0.1	0.09	0.03	0.11	0.22	0.0	0.0	0.0	0.01	0.03	0.24	0.43	0.38	0.12	0.22	1.0	0.04	0.4	0.29	0.04	0.05	0.01
AMTR_s00003p00247330 (evm_27.TU.AmTr_v1.0_scaffold00003.286)	0.01	0.0	0.0	0.0	0.11	0.0	0.0	0.0	0.0	0.0	0.12	0.21	0.24	0.14	0.21	1.0	0.0	0.02	0.03	0.0	0.0	0.0
AMTR_s00005p00155460 (evm_27.TU.AmTr_v1.0_scaffold00005.47)	0.0	0.0	0.0	0.04	0.03	0.0	0.0	0.0	0.0	0.0	0.05	0.01	0.6	0.15	0.03	1.0	0.0	0.09	0.12	0.23	0.03	0.09
AMTR_s00007p00269150 (TPS03)	0.0	0.01	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.03	0.08	0.14	0.64	0.1	1.0	0.0	0.0	0.01	0.0	0.0	0.0
AMTR_s00010p00243760 (PMT5)	0.22	0.0	0.0	0.48	0.04	0.0	0.02	0.0	0.0	0.0	0.54	0.27	1.0	0.58	0.28	0.85	0.2	0.54	0.55	0.73	0.35	0.04
AMTR_s00010p00262830 (evm_27.TU.AmTr_v1.0_scaffold00010.478)	0.0	0.0	0.0	0.0	0.14	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.2	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.33
AMTR_s00013p00061170 (evm_27.TU.AmTr_v1.0_scaffold00013.23)	0.78	0.0	0.0	0.0	0.09	0.0	0.0	0.0	0.0	0.0	0.38	0.24	0.61	1.0	0.33	0.4	0.05	0.67	0.53	0.53	0.26	0.21
AMTR_s00013p00061220 (evm_27.TU.AmTr_v1.0_scaffold00013.24)	1.0	0.0	0.0	0.04	0.05	0.0	0.0	0.0	0.0	0.0	0.49	0.28	0.58	0.81	0.28	0.4	0.14	0.81	0.59	0.43	0.48	0.25
AMTR_s00016p00102330 (evm_27.TU.AmTr_v1.0_scaffold00016.63)	0.0	0.0	0.0	0.0	0.07	0.0	0.0	0.0	0.0	0.0	0.33	0.28	0.47	1.0	0.14	0.0	0.23	0.2	0.02	0.13	0.4	0.03
AMTR_s00018p00139030 (evm_27.TU.AmTr_v1.0_scaffold00018.63)	0.09	0.0	0.0	0.02	0.05	0.0	0.0	0.0	0.0	0.0	0.13	0.13	0.18	0.66	0.11	1.0	0.02	0.0	0.01	0.0	0.04	0.26
AMTR_s00019p00242980 (XTR6)	0.08	0.29	0.14	0.03	0.08	0.0	0.0	0.0	0.0	0.0	0.07	0.07	1.0	0.84	0.17	0.68	0.04	0.09	0.16	0.49	0.1	0.01
AMTR_s00019p00243070 (SEN4)	0.06	0.0	0.03	0.13	0.02	0.04	0.0	0.0	0.0	0.0	0.1	0.09	0.92	0.47	0.1	1.0	0.06	0.14	0.16	0.4	0.19	0.0
AMTR_s00021p00122990 (TBL38)	0.71	0.83	0.0	0.02	0.12	0.0	0.0	0.0	0.0	0.0	0.46	0.91	1.0	0.84	0.27	0.16	0.81	0.74	0.57	0.58	0.48	0.32
AMTR_s00021p00123200 (TBL38)	0.78	0.67	0.0	0.03	0.17	0.0	0.01	0.0	0.0	0.0	0.35	0.6	1.0	0.83	0.31	0.09	0.5	0.51	0.49	0.7	0.19	0.24
AMTR_s00026p00199790 (evm_27.TU.AmTr_v1.0_scaffold00026.101)	0.0	0.3	0.0	0.0	0.28	0.0	0.0	0.0	0.01	0.03	0.27	0.75	0.41	0.85	0.4	1.0	0.09	0.27	0.1	0.02	0.07	0.38
AMTR_s00032p00021630 (evm_27.TU.AmTr_v1.0_scaffold00032.5)	0.19	0.47	0.33	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.12	0.06	0.66	0.03	0.02	1.0	0.02	0.05	0.01	0.01	0.0	0.04
AMTR_s00033p00208170 (PAP26)	0.4	0.35	0.28	0.31	0.27	0.0	0.13	0.12	0.22	0.28	0.7	0.98	0.59	0.5	0.25	0.92	0.41	1.0	0.51	0.16	0.38	0.4
AMTR_s00044p00196850 (BCAT3)	0.27	0.27	0.17	0.05	0.21	0.0	0.01	0.0	0.01	0.01	0.26	0.14	0.19	1.0	0.53	0.82	0.1	0.08	0.15	0.03	0.07	0.06
AMTR_s00049p00187420 (evm_27.TU.AmTr_v1.0_scaffold00049.191)	0.0	0.0	0.0	0.03	0.06	0.0	0.03	0.0	0.03	0.01	0.13	0.11	0.44	1.0	0.38	0.84	0.01	0.01	0.04	0.01	0.01	0.11
AMTR_s00049p00188370 (evm_27.TU.AmTr_v1.0_scaffold00049.191)	0.0	0.0	0.0	0.0	0.05	0.0	0.0	0.0	0.0	0.0	0.14	0.1	0.26	0.7	0.37	1.0	0.0	0.0	0.01	0.0	0.0	0.03
AMTR_s00051p00057470 (evm_27.TU.AmTr_v1.0_scaffold00051.21)	0.34	0.16	0.13	0.0	0.15	0.02	0.1	0.0	0.09	0.08	0.42	0.5	0.31	1.0	0.26	0.18	0.23	0.21	0.12	0.04	0.07	0.1
AMTR_s00051p00057510 (evm_27.TU.AmTr_v1.0_scaffold00051.22)	0.52	0.43	0.31	0.12	0.2	0.05	0.11	0.0	0.08	0.09	0.41	0.6	0.35	1.0	0.29	0.2	0.06	0.19	0.16	0.03	0.05	0.11
AMTR_s00054p00046250 (evm_27.TU.AmTr_v1.0_scaffold00054.16)	0.38	0.02	0.14	0.24	0.11	0.0	0.1	0.0	0.21	0.23	0.74	1.0	0.45	0.59	0.17	0.52	0.3	0.58	0.4	0.11	0.4	0.21
AMTR_s00059p00157160 (evm_27.TU.AmTr_v1.0_scaffold00059.144)	0.12	0.14	0.15	0.03	0.1	0.0	0.0	0.0	0.0	0.0	0.17	0.29	0.04	1.0	0.36	0.67	0.07	0.12	0.17	0.0	0.0	0.01
AMTR_s00061p00098470 (evm_27.TU.AmTr_v1.0_scaffold00061.74)	0.21	0.02	0.0	0.52	0.08	0.0	0.0	0.0	0.0	0.0	0.47	0.22	1.0	0.42	0.54	0.29	0.63	0.07	0.03	0.08	0.01	0.0
AMTR_s00070p00181900 (evm_27.TU.AmTr_v1.0_scaffold00070.115)	0.01	0.01	0.11	0.06	0.01	0.0	0.0	0.01	0.0	0.0	0.05	0.03	0.93	0.34	0.16	1.0	0.01	0.01	0.02	0.06	0.02	0.06
AMTR_s00074p00194110 (evm_27.TU.AmTr_v1.0_scaffold00074.121)	0.0	0.32	0.0	0.0	0.42	0.0	0.0	0.0	0.01	0.02	0.0	0.0	0.49	0.17	0.2	1.0	0.0	0.0	0.19	0.01	0.0	0.02
AMTR_s00077p00127700 (MES17)	0.1	0.11	0.0	0.03	0.11	0.0	0.0	0.0	0.0	0.0	0.57	0.57	1.0	0.69	0.2	0.22	0.4	0.17	0.13	0.29	0.17	0.2
AMTR_s00077p00129560 (MES17)	0.0	0.0	0.18	0.0	0.02	0.0	0.0	0.0	0.0	0.01	0.0	0.01	0.5	0.87	0.05	1.0	0.0	0.0	0.08	0.35	0.2	0.11
AMTR_s00077p00130740 (MES17)	0.0	0.0	0.18	0.0	0.01	0.01	0.0	0.0	0.0	0.0	0.0	0.01	0.72	0.92	0.03	1.0	0.0	0.0	0.13	0.3	0.08	0.14
AMTR_s00101p00026570 (evm_27.TU.AmTr_v1.0_scaffold00101.4)	0.0	0.3	0.0	0.2	0.19	0.0	0.01	0.01	0.04	0.03	0.37	0.29	0.6	0.78	0.3	1.0	0.1	0.28	0.68	0.32	0.57	0.33
AMTR_s00119p00112700 (PKS4)	0.0	0.01	0.0	0.04	0.0	0.0	0.0	0.02	0.0	0.0	0.21	0.14	1.0	0.09	0.03	0.75	0.11	0.09	0.12	0.24	0.41	0.15
AMTR_s00154p00062710 (YSL4)	0.07	0.07	0.06	0.94	0.05	0.0	0.0	0.0	0.02	0.01	0.32	0.25	0.63	0.74	0.23	0.57	0.05	0.42	1.0	0.88	0.8	0.55
AMTR_s00154p00064550 (YSL7)	0.18	0.0	0.11	0.3	0.07	0.0	0.01	0.01	0.03	0.01	0.32	0.22	1.0	0.72	0.27	0.53	0.09	0.39	0.73	0.81	0.83	0.57
AMTR_s00154p00065510 (YSL6)	0.01	0.0	0.12	0.23	0.03	0.01	0.0	0.0	0.01	0.0	0.4	0.36	0.48	0.57	0.19	0.51	0.15	0.45	0.64	0.6	1.0	0.44
AMTR_s00163p00053930 (scpl20)	0.12	0.03	0.15	0.04	0.14	0.01	0.03	0.02	0.02	0.03	0.14	0.47	0.54	0.67	0.18	1.0	0.08	0.05	0.02	0.0	0.01	0.11
AMTR_s00215p00035030 (evm_27.TU.AmTr_v1.0_scaffold00215.10)	0.28	0.23	0.0	0.0	0.37	0.0	0.0	0.0	0.0	0.0	0.0	0.48	0.46	0.02	0.11	1.0	0.0	0.0	0.78	0.25	0.0	0.02
AMTR_s00216p00019650 (RLP13)	0.04	0.24	0.0	0.03	0.0	0.0	0.0	0.02	0.0	0.0	0.25	0.52	0.5	0.02	0.04	1.0	0.06	0.12	0.14	0.06	0.12	0.0
AMTR_s00741p00012870 (evm_27.TU.AmTr_v1.0_scaffold00741.1)	0.03	0.05	0.02	0.12	0.15	0.06	0.0	0.0	0.0	0.0	0.25	0.24	0.14	0.05	0.05	1.0	0.0	0.06	0.04	0.02	0.0	0.0
AMTR_s03202p00005850 (OMT1)	0.02	0.0	0.01	0.0	0.18	0.0	0.0	0.0	0.0	0.0	0.14	0.25	0.32	0.14	0.17	1.0	0.0	0.01	0.02	0.0	0.0	0.0

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)