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Heatmap: Cluster_46 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
10.54 21.65 13.3 21.16 17.56 0.0 2.32 0.07 1.19 1.34 81.58 86.97 96.8 87.1 48.53 71.8 25.27 66.59 96.42 46.2 29.24 30.31
10.45 0.36 0.0 0.14 6.14 0.0 1.03 2.22 1.1 0.85 25.38 12.39 38.19 19.57 7.94 67.72 14.02 18.41 17.34 3.55 13.66 9.41
27.9 10.69 10.03 14.28 41.17 0.68 0.23 0.08 0.22 0.64 72.71 88.05 95.67 114.4 76.69 32.28 61.06 54.88 33.95 30.55 29.7 5.65
0.0 0.0 0.0 0.0 0.2 0.0 0.29 0.0 1.14 0.9 0.75 2.59 8.91 23.49 2.0 44.41 0.0 1.51 1.35 0.64 0.0 25.04
8.83 0.0 0.0 0.0 1.0 0.0 0.26 0.0 0.48 0.5 0.68 1.38 7.85 12.53 0.86 26.71 0.0 0.0 1.08 0.61 0.0 18.77
130.21 94.88 51.37 23.21 36.04 0.88 27.4 5.84 94.91 62.58 109.06 93.1 99.71 82.74 64.16 67.14 74.32 102.26 68.78 43.51 73.96 56.16
17.99 16.04 4.71 18.85 38.28 0.36 0.54 0.0 2.1 4.53 42.29 74.49 66.48 20.1 39.25 174.75 7.76 70.16 50.08 6.63 9.15 2.57
AMTR_s00003p00247330 (evm_27.TU.AmTr_v1.0_scaffold00003.286)
 8.55 0.0 0.0 0.0 138.51 0.0 1.21 4.64 0.66 2.86 152.78 274.86 311.97 179.67 273.37 1286.03 6.39 27.17 33.02 2.5 0.0 1.14
AMTR_s00005p00155460 (evm_27.TU.AmTr_v1.0_scaffold00005.47)
 0.0 0.0 0.0 3.26 2.52 0.0 0.08 0.0 0.15 0.13 3.73 0.43 49.68 12.37 2.67 82.11 0.2 7.46 10.23 19.04 2.68 7.67
0.0 5.41 0.0 0.0 7.6 0.87 0.4 0.0 0.03 0.03 12.76 38.25 66.32 306.94 46.18 481.4 1.73 0.13 6.28 0.18 0.61 0.03
21.84 0.0 0.0 46.73 3.59 0.0 1.97 0.07 0.44 0.43 52.04 25.94 97.22 56.83 27.12 82.49 19.27 52.15 53.26 70.66 34.37 3.7
AMTR_s00010p00262830 (evm_27.TU.AmTr_v1.0_scaffold00010.478)
 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.37 0.0 0.0 0.0 0.0 0.0 0.12
AMTR_s00013p00061170 (evm_27.TU.AmTr_v1.0_scaffold00013.23)
 9.58 0.0 0.0 0.0 1.16 0.0 0.03 0.0 0.02 0.03 4.74 3.02 7.49 12.37 4.04 5.0 0.56 8.23 6.58 6.56 3.17 2.65
AMTR_s00013p00061220 (evm_27.TU.AmTr_v1.0_scaffold00013.24)
 7.45 0.0 0.0 0.28 0.34 0.0 0.02 0.0 0.02 0.02 3.65 2.11 4.35 6.02 2.08 2.99 1.03 6.05 4.4 3.2 3.58 1.83
AMTR_s00016p00102330 (evm_27.TU.AmTr_v1.0_scaffold00016.63)
 0.0 0.0 0.0 0.0 0.85 0.0 0.0 0.0 0.0 0.0 4.25 3.63 6.02 12.9 1.82 0.0 3.01 2.55 0.28 1.65 5.14 0.4
AMTR_s00018p00139030 (evm_27.TU.AmTr_v1.0_scaffold00018.63)
 6.84 0.0 0.0 1.22 3.89 0.0 0.02 0.0 0.01 0.0 10.53 10.6 13.96 52.2 8.93 79.43 1.66 0.38 0.91 0.39 3.31 20.28
27.8 96.16 46.84 10.82 25.59 0.6 1.02 0.03 1.05 0.58 22.94 21.84 329.07 275.25 55.72 224.91 13.09 30.72 52.24 160.82 34.46 3.69
31.02 0.0 14.76 64.58 12.38 19.67 0.19 0.0 0.03 0.04 48.84 47.56 473.19 238.65 49.88 512.99 30.97 73.07 82.57 207.22 98.54 1.34
29.38 34.57 0.0 0.66 5.13 0.13 0.06 0.01 0.05 0.05 18.96 37.97 41.58 34.82 11.26 6.84 33.5 30.88 23.76 23.91 19.94 13.23
94.07 80.0 0.0 3.07 20.63 0.0 0.61 0.16 0.14 0.18 41.55 72.12 119.9 99.2 36.67 10.23 59.4 60.93 58.7 83.81 23.38 28.9
AMTR_s00026p00199790 (evm_27.TU.AmTr_v1.0_scaffold00026.101)
 0.0 18.68 0.0 0.04 17.21 0.0 0.18 0.08 0.62 1.76 16.36 46.26 24.96 52.13 24.54 61.33 5.55 16.52 6.1 1.16 4.3 23.46
AMTR_s00032p00021630 (evm_27.TU.AmTr_v1.0_scaffold00032.5)
 68.87 174.13 122.84 0.0 0.72 0.0 0.13 0.0 0.0 0.03 42.85 21.85 243.31 9.39 6.88 369.37 6.51 17.15 5.28 2.39 1.18 16.17
34.51 30.05 23.9 26.78 23.49 0.1 11.21 10.78 19.43 24.46 60.79 84.94 51.0 43.71 21.48 80.04 35.23 86.64 44.57 13.91 32.6 34.76
40.31 40.14 24.62 8.08 31.14 0.1 1.79 0.05 1.88 2.19 38.83 20.48 27.64 147.45 78.01 121.26 14.69 11.3 22.0 4.81 10.82 9.58
AMTR_s00049p00187420 (evm_27.TU.AmTr_v1.0_scaffold00049.191)
 0.0 0.0 0.0 1.86 3.63 0.0 2.04 0.02 1.63 0.8 7.6 6.65 26.5 59.74 22.71 50.14 0.59 0.75 2.46 0.77 0.38 6.74
AMTR_s00049p00188370 (evm_27.TU.AmTr_v1.0_scaffold00049.191)
 0.0 0.0 0.0 0.02 9.84 0.0 0.3 0.0 0.12 0.03 26.18 19.93 49.62 134.0 71.16 192.53 0.26 0.0 1.02 0.02 0.0 6.54
AMTR_s00051p00057470 (evm_27.TU.AmTr_v1.0_scaffold00051.21)
 65.74 30.78 24.85 0.2 29.5 3.92 20.34 0.0 18.12 16.34 81.2 97.16 60.2 194.16 50.71 33.98 44.6 41.06 23.53 8.64 13.16 19.42
AMTR_s00051p00057510 (evm_27.TU.AmTr_v1.0_scaffold00051.22)
 52.34 44.12 31.0 12.4 20.21 5.43 11.39 0.0 8.2 8.72 41.35 61.11 35.61 101.46 29.04 20.05 6.47 19.67 16.38 3.25 5.29 11.37
AMTR_s00054p00046250 (evm_27.TU.AmTr_v1.0_scaffold00054.16)
 10.07 0.49 3.74 6.21 2.89 0.0 2.52 0.07 5.47 6.08 19.49 26.19 11.89 15.49 4.5 13.71 7.74 15.3 10.43 2.76 10.37 5.53
AMTR_s00059p00157160 (evm_27.TU.AmTr_v1.0_scaffold00059.144)
 21.67 24.73 27.32 5.31 17.15 0.28 0.08 0.0 0.04 0.02 29.87 52.28 7.52 177.87 63.79 118.54 12.78 21.0 29.4 0.83 0.11 2.27
AMTR_s00061p00098470 (evm_27.TU.AmTr_v1.0_scaffold00061.74)
 24.97 2.26 0.0 63.21 9.73 0.0 0.06 0.11 0.02 0.01 57.1 26.65 121.44 50.6 65.9 35.19 76.2 8.72 3.74 9.85 1.54 0.15
AMTR_s00070p00181900 (evm_27.TU.AmTr_v1.0_scaffold00070.115)
 0.78 1.3 10.63 5.97 0.99 0.1 0.05 0.55 0.01 0.0 5.38 2.88 93.99 34.16 16.65 101.23 0.86 1.47 1.89 5.64 2.27 5.63
AMTR_s00074p00194110 (evm_27.TU.AmTr_v1.0_scaffold00074.121)
 0.0 3.52 0.0 0.0 4.64 0.0 0.0 0.0 0.11 0.17 0.0 0.0 5.5 1.9 2.26 11.16 0.0 0.0 2.15 0.12 0.0 0.27
12.22 14.67 0.0 4.01 13.49 0.0 0.13 0.06 0.04 0.05 72.75 73.28 127.79 88.06 25.22 28.18 51.29 21.38 16.96 37.61 21.16 25.07
0.0 0.0 4.87 0.0 0.46 0.0 0.07 0.0 0.06 0.15 0.13 0.21 13.54 23.53 1.3 27.17 0.0 0.0 2.28 9.56 5.4 3.08
0.0 0.0 19.44 0.0 0.75 1.1 0.07 0.09 0.09 0.06 0.16 0.55 76.18 97.38 3.58 105.93 0.0 0.48 14.03 31.41 8.23 15.07
AMTR_s00101p00026570 (evm_27.TU.AmTr_v1.0_scaffold00101.4)
 0.0 5.64 0.0 3.77 3.49 0.05 0.28 0.12 0.77 0.55 6.87 5.4 11.13 14.61 5.64 18.63 1.84 5.29 12.64 5.93 10.58 6.23
0.02 0.37 0.08 1.32 0.1 0.0 0.01 0.63 0.0 0.0 7.12 4.64 34.2 3.02 0.94 25.82 3.86 3.12 3.94 8.25 14.1 5.17
10.07 10.04 8.73 133.02 7.49 0.24 0.68 0.12 3.49 1.85 45.5 35.15 89.2 105.15 32.7 80.75 7.45 58.67 141.24 124.79 113.37 78.26
2.65 0.0 1.64 4.3 0.95 0.0 0.1 0.1 0.37 0.11 4.61 3.25 14.57 10.48 3.9 7.7 1.34 5.69 10.65 11.85 12.13 8.32
0.51 0.03 5.49 10.66 1.3 0.24 0.06 0.0 0.53 0.2 18.58 16.84 22.28 26.43 8.81 23.93 6.93 20.7 29.76 27.9 46.49 20.27
22.31 5.81 29.53 7.9 27.82 1.7 6.43 4.15 4.25 5.46 27.18 90.41 103.31 129.08 33.76 192.52 14.85 9.7 4.08 0.9 1.74 21.52
AMTR_s00215p00035030 (evm_27.TU.AmTr_v1.0_scaffold00215.10)
 0.68 0.56 0.0 0.0 0.9 0.0 0.0 0.0 0.0 0.0 0.0 1.18 1.12 0.04 0.26 2.43 0.0 0.0 1.9 0.62 0.0 0.04
2.09 11.61 0.04 1.44 0.15 0.12 0.01 0.94 0.0 0.02 11.85 25.05 23.75 0.83 1.98 47.9 3.07 5.75 6.64 3.07 5.63 0.11
AMTR_s00741p00012870 (evm_27.TU.AmTr_v1.0_scaffold00741.1)
 14.81 24.0 7.87 55.83 71.93 27.45 2.21 0.32 0.66 1.38 118.87 111.59 63.69 22.0 24.16 471.27 1.42 26.63 17.02 7.18 0.22 1.87
19.89 0.0 11.75 0.56 150.5 0.0 1.45 0.06 0.38 0.07 115.73 212.82 270.33 114.44 142.31 839.62 1.75 11.75 12.8 0.09 0.66 1.12

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)