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Heatmap: Cluster_51 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
70.2 156.82 59.77 0.0 90.61 13.66 38.85 35.71 30.51 31.12 72.06 67.46 51.09 58.87 56.02 90.33 32.2 35.08 67.55 38.11 25.19 45.07
AMTR_s00001p00125890 (evm_27.TU.AmTr_v1.0_scaffold00001.100)
 0.0 9.85 0.0 0.0 10.37 1.44 0.06 0.0 0.0 0.08 0.0 3.25 0.07 0.06 2.23 0.0 0.21 0.0 0.36 0.0 2.55 0.06
AMTR_s00007p00256610 (evm_27.TU.AmTr_v1.0_scaffold00007.302)
 0.0 10.08 0.17 0.55 5.47 0.0 1.97 1.76 4.16 2.87 5.14 5.04 3.06 2.86 3.52 1.73 6.03 2.92 2.39 1.48 3.72 3.28
AMTR_s00010p00251210 (evm_27.TU.AmTr_v1.0_scaffold00010.358)
 0.0 26.94 12.49 2.74 14.45 0.0 0.15 0.0 0.13 0.2 1.35 1.12 1.52 0.37 3.28 0.38 2.16 0.33 0.24 1.0 0.88 1.07
0.11 23.65 7.05 1.07 14.94 0.0 0.27 0.06 0.28 0.32 2.95 2.62 1.84 0.66 1.95 1.13 1.79 4.55 6.83 8.26 3.03 9.94
AMTR_s00017p00195640 (evm_27.TU.AmTr_v1.0_scaffold00017.115)
 0.0 17.17 0.0 0.14 9.0 0.0 0.37 4.56 0.7 0.82 7.41 15.63 0.89 0.41 2.08 0.4 5.89 0.77 0.46 0.16 0.46 2.95
0.05 8.46 3.2 0.06 6.53 0.22 0.03 0.07 0.05 0.13 0.12 0.21 0.56 2.81 1.7 0.0 0.0 0.0 0.0 0.0 0.16 0.44
AMTR_s00020p00195570 (evm_27.TU.AmTr_v1.0_scaffold00020.78)
 3.01 22.08 0.0 0.0 8.17 0.0 0.0 0.0 0.15 0.34 3.69 1.44 2.35 0.26 2.33 0.97 0.73 3.77 0.56 1.25 5.64 0.54
AMTR_s00021p00216250 (evm_27.TU.AmTr_v1.0_scaffold00021.196)
 17.27 98.66 40.88 1.42 49.03 33.64 1.16 0.15 2.05 2.59 38.71 53.76 37.95 27.89 18.37 49.11 33.26 27.68 43.15 21.78 31.86 28.89
AMTR_s00022p00230660 (evm_27.TU.AmTr_v1.0_scaffold00022.310)
 4.56 11.05 7.48 0.09 7.72 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.05 0.0 1.25 0.0 0.0 0.0 0.0 0.08 0.0 0.0
AMTR_s00023p00228380 (evm_27.TU.AmTr_v1.0_scaffold00023.177)
 0.0 5.62 0.0 0.24 5.59 0.0 0.08 0.0 0.08 0.0 0.65 0.0 0.36 0.08 0.7 0.0 0.57 0.0 0.83 0.06 5.75 0.2
AMTR_s00023p00230620 (evm_27.TU.AmTr_v1.0_scaffold00023.184)
 3.61 15.57 10.19 0.0 8.58 0.0 0.41 0.0 1.38 0.72 3.29 1.64 2.37 1.87 1.88 1.66 3.1 1.07 0.66 1.18 0.32 3.04
AMTR_s00024p00160570 (evm_27.TU.AmTr_v1.0_scaffold00024.116)
 5.31 17.57 6.93 0.24 20.96 0.25 5.42 0.02 10.61 8.05 14.54 17.8 9.6 9.15 10.89 7.1 20.79 8.13 7.13 10.11 10.04 9.92
27.23 93.59 13.61 27.76 51.62 4.38 26.95 1.05 10.6 13.03 48.99 35.87 46.01 37.9 40.82 29.3 59.54 26.85 29.71 46.79 20.97 40.64
AMTR_s00025p00247140 (evm_27.TU.AmTr_v1.0_scaffold00025.396)
 0.0 11.89 0.0 0.31 5.89 0.27 0.34 0.0 0.53 0.39 6.83 9.23 4.31 2.41 3.32 0.52 3.78 0.9 0.2 1.12 0.2 0.63
AMTR_s00027p00235310 (evm_27.TU.AmTr_v1.0_scaffold00027.124)
 0.0 1.03 0.0 0.1 0.38 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00029p00110740 (evm_27.TU.AmTr_v1.0_scaffold00029.119)
 22.4 71.83 18.29 0.61 52.01 2.4 11.78 14.45 15.65 12.67 37.85 47.55 19.27 19.23 24.11 14.5 22.8 18.43 18.59 18.62 9.49 21.9
AMTR_s00038p00052930 (evm_27.TU.AmTr_v1.0_scaffold00038.18)
 6.74 37.66 0.0 2.42 17.52 0.0 7.9 0.0 6.54 5.88 13.98 9.83 11.69 12.09 6.3 9.49 15.26 9.22 4.73 9.88 2.76 10.63
AMTR_s00044p00163450 (evm_27.TU.AmTr_v1.0_scaffold00044.178)
 0.0 40.47 0.0 0.03 38.79 0.0 0.11 0.05 0.08 0.12 9.56 8.26 9.21 9.95 9.27 1.63 2.28 1.21 1.84 2.09 2.16 4.79
AMTR_s00045p00117730 (evm_27.TU.AmTr_v1.0_scaffold00045.114)
 9.86 26.82 0.0 0.02 13.96 6.47 0.93 0.0 0.82 0.43 9.68 13.66 10.0 5.94 3.73 5.34 5.72 2.39 4.66 1.51 5.72 7.97
54.78 112.87 59.72 1.7 149.76 0.0 3.45 0.33 3.65 4.07 96.8 100.44 35.95 16.41 24.89 26.95 91.38 17.45 18.84 24.23 13.15 39.19
0.0 0.76 0.0 0.0 0.39 0.0 0.3 0.02 0.12 0.18 0.0 0.0 0.01 0.01 0.05 0.0 0.0 0.0 0.0 0.02 0.0 0.0
AMTR_s00055p00184890 (evm_27.TU.AmTr_v1.0_scaffold00055.106)
 85.04 127.37 48.04 22.31 105.07 78.62 11.09 0.13 11.4 12.32 77.42 73.01 64.01 48.4 48.84 56.21 58.25 83.59 65.47 78.58 71.48 44.51
AMTR_s00057p00106670 (evm_27.TU.AmTr_v1.0_scaffold00057.83)
 0.0 5.09 0.0 0.0 5.92 0.0 0.21 0.0 0.06 0.03 0.29 0.0 0.0 0.0 0.26 0.0 0.78 0.0 0.0 0.66 5.86 0.32
AMTR_s00057p00217720 (evm_27.TU.AmTr_v1.0_scaffold00057.278)
 128.29 586.76 326.09 0.45 503.44 97.22 112.47 74.05 108.59 101.92 333.0 489.71 174.55 117.74 159.94 107.69 307.05 153.36 133.71 80.07 31.28 230.59
AMTR_s00059p00058530 (evm_27.TU.AmTr_v1.0_scaffold00059.36)
 24.0 37.21 0.0 0.0 24.76 0.0 0.43 0.0 0.4 0.18 12.01 17.65 15.91 12.18 6.35 9.13 4.7 3.64 9.08 13.57 10.6 7.55
AMTR_s00061p00031230 (evm_27.TU.AmTr_v1.0_scaffold00061.4)
 0.0 6.97 0.0 0.0 4.33 0.0 0.03 0.12 0.06 0.0 0.0 0.75 0.16 0.05 0.47 0.0 0.0 0.66 0.0 0.04 1.18 0.1
13.06 38.42 38.05 0.15 30.58 0.64 0.67 0.0 0.35 0.73 16.83 35.19 3.17 0.79 6.11 5.48 24.23 3.89 7.24 5.0 1.11 8.89
AMTR_s00077p00180970 (evm_27.TU.AmTr_v1.0_scaffold00077.204)
 1.0 15.34 0.0 0.04 14.58 0.0 3.14 0.56 4.64 4.5 9.2 7.37 9.48 3.93 5.79 1.79 9.35 8.0 5.58 6.09 4.4 4.62
AMTR_s00089p00097770 (evm_27.TU.AmTr_v1.0_scaffold00089.53)
 17.21 27.45 9.19 2.06 34.98 0.16 18.35 4.44 12.65 15.43 9.23 10.09 3.54 9.24 13.86 0.4 7.63 3.07 7.42 5.98 5.4 0.73
AMTR_s00090p00159150 (evm_27.TU.AmTr_v1.0_scaffold00090.93)
 0.0 4.2 0.0 0.0 1.7 0.0 0.75 0.0 0.41 0.11 0.0 0.0 0.08 0.18 0.03 1.82 0.0 0.0 0.0 0.26 1.06 0.29
AMTR_s00090p00172940 (evm_27.TU.AmTr_v1.0_scaffold00090.105)
 1.14 37.84 4.21 0.0 35.21 0.0 13.27 0.0 8.29 7.39 11.33 15.15 9.44 4.46 7.02 5.12 14.25 6.63 9.3 6.64 2.75 4.77
AMTR_s00098p00075500 (evm_27.TU.AmTr_v1.0_scaffold00098.13)
 0.0 8.57 0.0 0.0 2.49 1.27 0.0 0.0 0.04 0.0 0.0 0.0 0.28 0.0 0.18 0.0 0.0 0.0 0.0 0.0 2.46 0.0
13.64 32.66 0.0 8.9 16.3 0.0 5.7 0.25 5.8 5.93 7.96 10.56 6.72 7.05 8.67 6.91 10.75 8.76 7.08 6.72 7.51 8.8
AMTR_s00109p00069190 (evm_27.TU.AmTr_v1.0_scaffold00109.54)
 28.93 68.38 77.71 9.83 64.9 7.21 4.09 25.46 9.0 5.98 58.22 45.5 38.44 29.03 21.32 29.42 27.75 50.71 38.82 13.43 33.59 17.86
AMTR_s00111p00072010 (evm_27.TU.AmTr_v1.0_scaffold00111.42)
 31.54 34.66 0.0 1.96 17.03 0.0 1.3 5.72 2.16 2.39 22.49 23.6 13.04 15.25 7.08 6.81 6.24 8.32 18.51 11.65 19.4 12.26
AMTR_s00120p00079170 (evm_27.TU.AmTr_v1.0_scaffold00120.36)
 13.63 62.48 2.19 0.33 29.28 0.0 4.63 16.38 3.36 4.07 25.1 26.54 20.81 2.75 4.41 25.6 33.19 21.33 15.85 13.88 9.23 17.83
AMTR_s00143p00105790 (evm_27.TU.AmTr_v1.0_scaffold00143.27)
 331.39 371.78 363.6 54.66 246.26 83.69 60.18 172.29 107.13 92.39 262.74 266.9 258.57 188.32 132.52 153.74 124.62 168.75 155.19 108.0 91.64 153.95
AMTR_s00152p00017090 (evm_27.TU.AmTr_v1.0_scaffold00152.1)
 0.65 3.66 0.65 0.0 2.57 0.0 0.11 0.42 0.19 0.03 0.0 0.0 0.65 0.26 0.32 2.46 0.35 0.0 0.0 0.51 0.0 0.29
AMTR_s00156p00055010 (evm_27.TU.AmTr_v1.0_scaffold00156.27)
 13.92 15.93 13.69 1.1 16.12 0.0 12.45 0.43 6.66 10.23 3.39 5.91 3.35 3.45 3.65 1.36 1.56 2.28 3.86 1.28 0.65 0.01
0.0 3.33 0.0 0.0 1.44 0.0 0.35 0.0 0.34 0.33 0.75 1.46 0.69 0.45 0.5 0.2 0.75 0.51 1.08 0.88 0.92 0.53
AMTR_s00165p00063860 (evm_27.TU.AmTr_v1.0_scaffold00165.41)
 150.28 372.5 182.03 27.99 242.78 78.28 38.34 30.03 29.71 36.07 142.38 160.13 188.63 147.04 128.49 147.5 76.78 104.86 140.72 132.22 44.57 118.49
AMTR_s00173p00058300 (evm_27.TU.AmTr_v1.0_scaffold00173.14)
 11.75 44.8 61.98 0.33 73.54 1.07 3.83 18.49 5.03 6.75 76.5 73.16 41.74 36.57 33.8 16.02 29.04 26.21 33.32 11.19 4.93 29.32
AMTR_s03073p00008220 (evm_27.TU.AmTr_v1.0_scaffold03073.2)
 0.43 21.2 0.0 1.39 6.68 0.0 0.78 0.0 1.14 0.84 1.64 1.67 1.78 1.15 0.83 0.0 7.26 1.91 0.65 0.48 1.31 0.87
AMTR_s03576p00008700 (evm_27.TU.AmTr_v1.0_scaffold03576.1)
 0.0 14.05 0.0 0.03 11.52 0.0 0.02 0.0 0.03 0.03 1.59 2.09 1.5 0.57 4.57 0.85 0.49 0.73 0.72 0.23 0.0 1.99
AMTR_s05591p00003960 (evm_27.TU.AmTr_v1.0_scaffold05591.1)
 0.0 1.59 0.0 0.0 1.16 0.0 1.33 0.37 0.59 0.81 0.0 0.0 0.0 0.13 0.08 0.0 0.0 0.0 0.14 0.0 0.0 0.03

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)