Heatmap: Cluster_60 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
- - 3.31 1.61 - - - - - - - - -
-2.3 -4.08 2.57 1.15 1.65 - -1.96 -1.17 -1.6 - -2.26 -2.21 -
- - 3.17 - 2.0 - - - - - - - -
- - 2.95 - - - - 2.4 - - - - -
- - 3.28 - - - - 1.73 - - - - -
- - 3.08 - 2.18 - - - - - - - -
-2.42 0.38 1.82 0.24 0.23 - -2.31 0.82 -1.21 0.36 -0.58 0.34 -
-3.53 -4.29 2.26 1.94 1.4 -2.44 -1.24 -2.96 -1.15 -1.93 -2.71 - -
- - 2.93 2.42 - - - - - - - - -
- - 3.43 1.14 - - - - - - - - -
-2.54 - 2.6 2.08 1.21 - - - - -2.25 - - -
- - 2.75 1.48 1.8 - - - - - - - -
- - 3.01 2.3 - - - - - - - - -
- - 3.23 1.52 - - - -0.43 - - - - -
- - 2.99 1.41 1.25 - - - - - - - -
- -3.03 2.94 1.32 1.44 - - - - - - - -
- - 3.01 2.3 - - - - - - - - -
- -0.68 2.75 1.14 0.75 - - -1.71 - - - - 0.55
- - 2.94 1.23 0.76 - - 0.39 - - - - -
- - 2.97 2.36 - - - - - - - - -
-7.72 -3.92 2.81 1.79 1.08 - -3.59 -1.85 - - - - -
- - 3.17 - 2.0 - - - - - - - -
- - 3.08 0.98 1.37 - - - - - - - -
- - 2.86 2.17 0.34 - - - - - - - -
- - 2.74 2.29 -0.92 - - -0.16 - - - - -
- - 2.76 1.79 1.36 - -2.33 - - - - - -
- - 2.95 - - - - 2.4 - - - - -
- - 3.31 1.61 - - - - - - - - -
- - 3.01 2.3 - - - - - - - - -
- -1.84 3.33 1.41 - - - - - - - - -
- - 3.21 1.92 - - - - - - - - -
- - 2.89 2.22 -0.11 - - - - - - - -
- - 3.17 1.58 -0.02 - - - - - - - -
- - 2.99 1.21 1.45 - - - - - - - -
- - 3.01 2.3 - - - - - - - - -
- - 3.21 1.92 - - - - - - - - -
- -3.54 2.8 2.02 0.93 - - - - - - - -
- - 3.12 0.69 1.44 - - - - - - - -
- - 3.01 2.3 - - - - - - - - -
- - 2.93 1.4 1.45 - - - - - - - -
- - 3.2 1.93 - - - - - - - - -
- - 2.68 1.39 2.0 - - - - - - - -
- - 3.01 2.3 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.