Ehy_g16748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g18216 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g14450.1 | LOC_Os04g14450 | Pentatricopeptide repeat-containing protein At4g14820... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g17530.2 | LOC_Os11g17530 | Pentatricopeptide repeat-containing protein At2g37320... | 0.02 | OrthoFinder output from all 47 species | |
Len_g02415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g17972 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g26486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g47056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g39084 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10428509g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.01 | OrthoFinder output from all 47 species | |
Msp_g04332 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g04335 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g09805 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g17466 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g17695 | EMB2758 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g28763 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g30310 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g31423 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g32586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g40822 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g43943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g48060 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07147 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g15041 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g41649 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g34904 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g40890 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g41304 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g12402 | SLO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g13583 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g13586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g32558 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g34529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g66077 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g02795 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g15720 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g30084 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g30607 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g07515 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g11085 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g13834 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g15182 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g15400 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g29583 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g36024 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0125.g021689 | No alias | S-adenosyl methionine transporter *(GOSAMT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g11900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29927 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g38610 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g108180.4.1 | Solyc01g108180 | RNA editing factor (MEF8). RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g10182 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g21770 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g29565 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06491 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g09309 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g17793 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g23004 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g25660 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g29865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30131 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e040855_P003 | Zm00001e040855 | Pentatricopeptide repeat-containing protein At2g37320... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041694_P001 | Zm00001e041694 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
Functional Annotation
Type | GO Term | Name | Evidence | Source |
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
CC | GO:0030896 | checkpoint clamp complex | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
InterPro domains | Description | Start | Stop |
IPR002885 | Pentatricopeptide_repeat | 250 | 297 |
IPR002885 | Pentatricopeptide_repeat | 223 | 246 |
IPR002885 | Pentatricopeptide_repeat | 757 | 787 |
IPR002885 | Pentatricopeptide_repeat | 628 | 655 |
IPR002885 | Pentatricopeptide_repeat | 555 | 584 |
IPR002885 | Pentatricopeptide_repeat | 353 | 379 |
IPR002885 | Pentatricopeptide_repeat | 657 | 684 |
IPR002885 | Pentatricopeptide_repeat | 454 | 481 |
IPR002885 | Pentatricopeptide_repeat | 145 | 194 |
IPR002885 | Pentatricopeptide_repeat | 881 | 939 |
ECC Pair graph
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