Coexpression cluster: Cluster_292 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 9.76% (4/41) 3.87 0.000164 0.012489
GO:1901362 organic cyclic compound biosynthetic process 7.32% (3/41) 3.67 0.001698 0.021511
GO:0090304 nucleic acid metabolic process 9.76% (4/41) 3.49 0.000443 0.022424
GO:0032774 RNA biosynthetic process 7.32% (3/41) 4.88 0.000151 0.022939
GO:0006139 nucleobase-containing compound metabolic process 9.76% (4/41) 2.97 0.001676 0.023162
GO:0005488 binding 31.71% (13/41) 1.28 0.001608 0.024443
GO:0046483 heterocycle metabolic process 9.76% (4/41) 2.84 0.002298 0.024952
GO:0006725 cellular aromatic compound metabolic process 9.76% (4/41) 2.81 0.002482 0.025155
GO:1901360 organic cyclic compound metabolic process 9.76% (4/41) 2.79 0.002648 0.025157
GO:0003674 molecular_function 43.9% (18/41) 0.95 0.002161 0.025271
GO:0051252 regulation of RNA metabolic process 7.32% (3/41) 3.02 0.006067 0.026349
GO:0097659 nucleic acid-templated transcription 4.88% (2/41) 5.11 0.001563 0.026404
GO:0006351 DNA-templated transcription 4.88% (2/41) 5.11 0.001563 0.026404
GO:0042803 protein homodimerization activity 2.44% (1/41) 7.96 0.004008 0.026488
GO:0034212 peptide N-acetyltransferase activity 2.44% (1/41) 7.96 0.004008 0.026488
GO:0000774 adenyl-nucleotide exchange factor activity 2.44% (1/41) 7.96 0.004008 0.026488
GO:0061733 peptide-lysine-N-acetyltransferase activity 2.44% (1/41) 7.96 0.004008 0.026488
GO:0004402 histone acetyltransferase activity 2.44% (1/41) 7.96 0.004008 0.026488
GO:0060590 ATPase regulator activity 2.44% (1/41) 7.96 0.004008 0.026488
GO:1903506 regulation of nucleic acid-templated transcription 7.32% (3/41) 3.03 0.005965 0.026665
GO:0006355 regulation of DNA-templated transcription 7.32% (3/41) 3.03 0.005965 0.026665
GO:2001141 regulation of RNA biosynthetic process 7.32% (3/41) 3.03 0.005965 0.026665
GO:0016573 histone acetylation 2.44% (1/41) 7.6 0.00515 0.026994
GO:0018394 peptidyl-lysine acetylation 2.44% (1/41) 7.6 0.00515 0.026994
GO:0006475 internal protein amino acid acetylation 2.44% (1/41) 7.6 0.00515 0.026994
GO:0008080 N-acetyltransferase activity 2.44% (1/41) 7.6 0.00515 0.026994
GO:0018393 internal peptidyl-lysine acetylation 2.44% (1/41) 7.6 0.00515 0.026994
GO:0010556 regulation of macromolecule biosynthetic process 7.32% (3/41) 2.95 0.006928 0.027001
GO:0009889 regulation of biosynthetic process 7.32% (3/41) 2.95 0.006928 0.027001
GO:0031326 regulation of cellular biosynthetic process 7.32% (3/41) 2.95 0.006928 0.027001
GO:0019219 regulation of nucleobase-containing compound metabolic process 7.32% (3/41) 2.99 0.006409 0.027059
GO:0018130 heterocycle biosynthetic process 7.32% (3/41) 3.82 0.001267 0.027513
GO:0043543 protein acylation 2.44% (1/41) 7.45 0.005721 0.028051
GO:0006473 protein acetylation 2.44% (1/41) 7.45 0.005721 0.028051
GO:0034654 nucleobase-containing compound biosynthetic process 7.32% (3/41) 4.09 0.000741 0.028152
GO:0010468 regulation of gene expression 7.32% (3/41) 2.91 0.007442 0.028281
GO:0051171 regulation of nitrogen compound metabolic process 7.32% (3/41) 2.85 0.008412 0.028413
GO:0080090 regulation of primary metabolic process 7.32% (3/41) 2.85 0.008412 0.028413
GO:0019222 regulation of metabolic process 7.32% (3/41) 2.82 0.00889 0.028752
GO:0016407 acetyltransferase activity 2.44% (1/41) 6.77 0.009138 0.028937
GO:0019898 extrinsic component of membrane 2.44% (1/41) 6.96 0.008 0.028953
GO:0016410 N-acyltransferase activity 2.44% (1/41) 6.96 0.008 0.028953
GO:0042802 identical protein binding 2.44% (1/41) 7.77 0.004579 0.029002
GO:0060255 regulation of macromolecule metabolic process 7.32% (3/41) 2.82 0.008858 0.02927
GO:0031323 regulation of cellular metabolic process 7.32% (3/41) 2.85 0.008349 0.029513
GO:0006366 transcription by RNA polymerase II 2.44% (1/41) 8.18 0.003436 0.030725
GO:0019438 aromatic compound biosynthetic process 7.32% (3/41) 3.83 0.001257 0.031851
GO:0009654 photosystem II oxygen evolving complex 2.44% (1/41) 6.52 0.010842 0.033633
GO:0043169 cation binding 9.76% (4/41) 2.14 0.012552 0.03469
GO:0043167 ion binding 17.07% (7/41) 1.45 0.012782 0.034695
GO:0004134 4-alpha-glucanotransferase activity 2.44% (1/41) 9.77 0.001147 0.034861
GO:0140640 catalytic activity, acting on a nucleic acid 4.88% (2/41) 3.56 0.012517 0.035232
GO:0097159 organic cyclic compound binding 19.51% (8/41) 1.33 0.012448 0.0357
GO:1901363 heterocyclic compound binding 19.51% (8/41) 1.33 0.012448 0.0357
GO:0046872 metal ion binding 9.76% (4/41) 2.16 0.012156 0.036229
GO:0018205 peptidyl-lysine modification 2.44% (1/41) 6.38 0.011977 0.03641
GO:0016570 histone modification 2.44% (1/41) 6.12 0.014242 0.03798
GO:0008173 RNA methyltransferase activity 2.44% (1/41) 5.86 0.017067 0.043969
GO:0009523 photosystem II 2.44% (1/41) 5.86 0.017067 0.043969
GO:0050794 regulation of cellular process 7.32% (3/41) 2.45 0.017625 0.04465
GO:0051087 chaperone binding 2.44% (1/41) 5.72 0.018758 0.046741
GO:0050789 regulation of biological process 7.32% (3/41) 2.4 0.019105 0.046838
GO:0065007 biological regulation 7.32% (3/41) 2.37 0.020233 0.048817
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_40 0.021 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_174 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_80 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_83 0.023 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_112 0.029 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_216 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_298 0.033 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_339 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_366 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_371 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_7 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_52 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_123 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_127 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_153 0.015 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_156 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.02 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_62 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_92 0.016 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_105 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_119 0.015 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_144 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_5 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_27 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_30 0.025 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_131 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_486 0.023 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_89 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_93 0.027 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_296 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_326 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_25 0.029 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_63 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_124 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_131 0.035 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_133 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_146 0.026 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_161 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_164 0.015 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_166 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_66 0.025 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_102 0.015 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_108 0.024 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_11 0.015 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_30 0.027 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_31 0.025 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_33 0.021 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_38 0.026 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_45 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_49 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_81 0.028 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_182 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_214 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_220 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_262 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_264 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_266 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_47 0.021 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_74 0.026 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_23 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_33 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_60 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_90 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_53 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_75 0.021 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_110 0.015 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_125 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_31 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_59 0.018 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_71 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_121 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_188 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_54 0.017 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_73 0.018 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_84 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_85 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_16 0.029 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_37 0.026 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_57 0.029 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_135 0.031 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_40 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_117 0.019 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_157 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_54 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_69 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_83 0.021 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_93 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_128 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_136 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_142 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_144 0.036 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_91 0.015 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_51 0.022 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_52 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_22 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_69 0.028 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_144 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_169 0.026 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_6 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_82 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_108 0.026 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_11 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_61 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_145 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_370 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_197 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_204 0.027 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_643 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_63 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_72 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_82 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_114 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_120 0.016 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_79 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_255 0.025 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_298 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_27 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_141 0.018 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_4 0.021 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_63 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_88 0.025 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_153 0.027 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_3 0.015 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_66 0.022 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_82 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_8 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_13 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_85 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_87 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_151 0.022 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_75 0.027 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_150 0.029 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_39 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_11 0.026 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_114 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_17 0.025 OrthoFinder output from all 47 species Compare
Sequences (41) (download table)

InterPro Domains

GO Terms

Family Terms