Coexpression cluster: Cluster_106 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 47.27% (78/165) 1.14 0.0 0.0
GO:0003824 catalytic activity 26.67% (44/165) 1.52 0.0 0.0
GO:0005488 binding 29.7% (49/165) 1.31 0.0 0.0
GO:1901363 heterocyclic compound binding 20.61% (34/165) 1.44 0.0 6e-06
GO:0097159 organic cyclic compound binding 20.61% (34/165) 1.44 0.0 6e-06
GO:0032555 purine ribonucleotide binding 11.52% (19/165) 1.82 2e-06 9.9e-05
GO:0000166 nucleotide binding 12.12% (20/165) 1.7 4e-06 0.000102
GO:1901265 nucleoside phosphate binding 12.12% (20/165) 1.7 4e-06 0.000102
GO:0030554 adenyl nucleotide binding 10.3% (17/165) 1.92 3e-06 0.000103
GO:0032553 ribonucleotide binding 11.52% (19/165) 1.8 3e-06 0.000103
GO:0008150 biological_process 25.45% (42/165) 1.07 2e-06 0.000108
GO:0097367 carbohydrate derivative binding 11.52% (19/165) 1.78 3e-06 0.000111
GO:0017076 purine nucleotide binding 12.12% (20/165) 1.77 2e-06 0.000111
GO:0032559 adenyl ribonucleotide binding 9.7% (16/165) 1.97 4e-06 0.000115
GO:0016787 hydrolase activity 9.7% (16/165) 1.9 7e-06 0.000171
GO:0036094 small molecule binding 12.12% (20/165) 1.63 8e-06 0.000172
GO:0043168 anion binding 11.52% (19/165) 1.66 1.1e-05 0.000213
GO:0043167 ion binding 14.55% (24/165) 1.39 1.6e-05 0.000285
GO:0035639 purine ribonucleoside triphosphate binding 10.3% (17/165) 1.74 1.6e-05 0.000297
GO:0071704 organic substance metabolic process 16.97% (28/165) 1.22 2.3e-05 0.000377
GO:0044238 primary metabolic process 16.36% (27/165) 1.25 2.3e-05 0.000394
GO:0005524 ATP binding 8.48% (14/165) 1.89 2.9e-05 0.000461
GO:0036211 protein modification process 6.67% (11/165) 2.17 4e-05 0.000604
GO:0008152 metabolic process 17.58% (29/165) 1.13 5.1e-05 0.000735
GO:0016887 ATP hydrolysis activity 3.03% (5/165) 3.65 5.6e-05 0.00077
GO:0043412 macromolecule modification 6.67% (11/165) 2.1 6.2e-05 0.000823
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.82% (3/165) 5.06 0.000107 0.001364
GO:1901564 organonitrogen compound metabolic process 12.12% (20/165) 1.34 0.00014 0.001719
GO:0006807 nitrogen compound metabolic process 13.33% (22/165) 1.24 0.000159 0.001891
GO:0140096 catalytic activity, acting on a protein 7.27% (12/165) 1.81 0.00019 0.002175
GO:0005515 protein binding 8.48% (14/165) 1.58 0.000279 0.003096
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.21% (2/165) 5.82 0.00059 0.006341
GO:0043170 macromolecule metabolic process 11.52% (19/165) 1.2 0.000656 0.006838
GO:0016570 histone modification 1.21% (2/165) 5.67 0.000724 0.007323
GO:0035601 protein deacylation 0.61% (1/165) 8.62 0.002532 0.019793
GO:0004730 pseudouridylate synthase activity 0.61% (1/165) 8.62 0.002532 0.019793
GO:0016575 histone deacetylation 0.61% (1/165) 8.62 0.002532 0.019793
GO:0006476 protein deacetylation 0.61% (1/165) 8.62 0.002532 0.019793
GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity 0.61% (1/165) 8.62 0.002532 0.019793
GO:0098732 macromolecule deacylation 0.61% (1/165) 8.62 0.002532 0.019793
GO:0016740 transferase activity 7.88% (13/165) 1.34 0.002117 0.020811
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.64% (6/165) 2.19 0.002242 0.021427
GO:0016491 oxidoreductase activity 6.06% (10/165) 1.55 0.002512 0.022738
GO:0019538 protein metabolic process 9.09% (15/165) 1.2 0.002506 0.023303
GO:0016817 hydrolase activity, acting on acid anhydrides 3.64% (6/165) 2.08 0.003266 0.023907
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.64% (6/165) 2.08 0.003224 0.024111
GO:0016462 pyrophosphatase activity 3.64% (6/165) 2.09 0.003155 0.024116
GO:0009987 cellular process 15.15% (25/165) 0.82 0.003799 0.026137
GO:0004198 calcium-dependent cysteine-type endopeptidase activity 0.61% (1/165) 8.04 0.003795 0.026643
GO:0004424 imidazoleglycerol-phosphate dehydratase activity 0.61% (1/165) 8.04 0.003795 0.026643
GO:0006508 proteolysis 3.03% (5/165) 2.26 0.004224 0.028491
GO:0030117 membrane coat 1.21% (2/165) 4.32 0.004608 0.030486
GO:0016773 phosphotransferase activity, alcohol group as acceptor 4.24% (7/165) 1.77 0.004885 0.031704
GO:0016772 transferase activity, transferring phosphorus-containing groups 4.85% (8/165) 1.59 0.005487 0.034954
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 0.61% (1/165) 7.3 0.006317 0.037468
GO:0009445 putrescine metabolic process 0.61% (1/165) 7.3 0.006317 0.037468
GO:0004668 protein-arginine deiminase activity 0.61% (1/165) 7.3 0.006317 0.037468
GO:0009446 putrescine biosynthetic process 0.61% (1/165) 7.3 0.006317 0.037468
GO:0016836 hydro-lyase activity 1.21% (2/165) 3.83 0.008893 0.047801
GO:0031461 cullin-RING ubiquitin ligase complex 0.61% (1/165) 6.62 0.010089 0.048201
GO:0003714 transcription corepressor activity 0.61% (1/165) 6.62 0.010089 0.048201
GO:0000151 ubiquitin ligase complex 0.61% (1/165) 6.62 0.010089 0.048201
GO:0005680 anaphase-promoting complex 0.61% (1/165) 6.62 0.010089 0.048201
GO:0000152 nuclear ubiquitin ligase complex 0.61% (1/165) 6.62 0.010089 0.048201
GO:0016593 Cdc73/Paf1 complex 0.61% (1/165) 6.62 0.010089 0.048201
GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity 0.61% (1/165) 6.82 0.008833 0.048231
GO:0043015 gamma-tubulin binding 0.61% (1/165) 6.82 0.008833 0.048231
GO:0004197 cysteine-type endopeptidase activity 0.61% (1/165) 6.82 0.008833 0.048231
GO:1990234 transferase complex 1.21% (2/165) 3.8 0.009203 0.048704
GO:0070085 glycosylation 1.21% (2/165) 3.78 0.009517 0.049605
GO:0006520 amino acid metabolic process 1.82% (3/165) 2.74 0.010578 0.049845
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_169 0.033 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_195 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_280 0.059 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_160 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_21 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_78 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_124 0.015 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_21 0.018 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_22 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_59 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_76 0.023 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_82 0.015 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_175 0.029 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_202 0.034 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_278 0.023 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_15 0.022 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_19 0.019 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_41 0.021 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_130 0.026 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_180 0.023 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_108 0.019 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_169 0.021 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_110 0.017 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_165 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_109 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_116 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_177 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_188 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_216 0.033 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_22 0.024 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_31 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_15 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_224 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_241 0.036 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_59 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_69 0.015 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_72 0.027 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_166 0.022 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_9 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_93 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_135 0.023 OrthoFinder output from all 47 species Compare
Sequences (165) (download table)

InterPro Domains

GO Terms

Family Terms