1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g48229

Cba_g48229 (emb2386)


Aliases : emb2386

Description : not classified & original description: none


Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g48229
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.01 OrthoFinder output from all 47 species
Ala_g23889 emb2386 component *(eL19) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Als_g56677 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61028.t1 Aspi01Gene61028 component *(eL19) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g08169 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Len_g04088 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Msp_g06900 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Nbi_g05153 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_410V3.1 Pp3c16_410 Ribosomal protein L19e family protein 0.01 OrthoFinder output from all 47 species
Pp3c21_11230V3.1 Pp3c21_11230 Ribosomal protein L19e family protein 0.01 OrthoFinder output from all 47 species
Ppi_g28399 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 107
No external refs found!