Gb_02576


Description : transcription factor (SBP)


Gene families : OG_01_0000102 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000102_tree ,
OG_02_0000092 (LandPlants) Phylogenetic Tree(s): OG_02_0000092_tree ,
OG_03_0000075 (SeedPlants) Phylogenetic Tree(s): OG_03_0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02576
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cre10.g433350 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01012247001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
LOC_Os08g41940.1 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10427464g0020 No alias Squamosa promoter-binding-like protein 14 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009093_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
GSVIVT01008135001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 LandPlants
GSVIVT01012247001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 LandPlants
MA_10427464g0020 No alias Squamosa promoter-binding-like protein 14 OS=Arabidopsis... 0.03 LandPlants
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.01 LandPlants
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.03 LandPlants
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e021425_P001 No alias transcription factor (SBP) 0.02 LandPlants
Zm00001e028442_P002 No alias transcription factor (SBP) 0.02 LandPlants
GSVIVT01012247001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004333 SBP_dom 246 319
No external refs found!