Cba_g46046 (HSI2, VAL1)

Aliases : HSI2, VAL1

Description : LAV-VAL-type transcription factor & original description: none

Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g46046

Target	Alias	Description	ECC score	Gene Family Method	Actions
Nbi_g23897	HSL1, VAL2, HSI2-L1	LAV-VAL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc10g075030.3.1	HSL1, VAL2,...	transcription factor (LAV-VAL)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	216	316

External Links

No external refs found!