Cba_g45359

Description : component *(eS7) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001505_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g45359
Cluster	HCCA: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
AT3G02560	No alias	Ribosomal protein S7e family protein	0.03	OrthoFinder output from all 47 species
AT5G16130	No alias	Ribosomal protein S7e family protein	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021682.9	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
Dcu_g29104	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Mp6g08120.1	No alias	component RPS7 of SSU proteome	0.02	OrthoFinder output from all 47 species
Pp3c20_1360V3.1	Pp3c20_1360	Ribosomal protein S7e family protein	0.02	OrthoFinder output from all 47 species
Pp3c24_18220V3.1	Pp3c24_18220	Ribosomal protein S7e family protein	0.02	OrthoFinder output from all 47 species
Pp3c8_22480V3.1	Pp3c8_22480	Ribosomal protein S7e family protein	0.02	OrthoFinder output from all 47 species
Ppi_g21823	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Spa_g22409	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Tin_g02457	No alias	component *(eS7) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e001349_P002	Zm00001e001349	component RPS7 of SSU proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000554	Ribosomal_S7e	2	136

External Links

No external refs found!

Cba_g45359

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation