Cba_g45209


Description : not classified & original description: none


Gene families : OG0000832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45209

Target Alias Description ECC score Gene Family Method Actions
Aop_g02997 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17935 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25110 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g25489 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g28434 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g65061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05985.t1 Aspi01Gene05985 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14692.t1 Aspi01Gene14692 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20037.t1 Aspi01Gene20037 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29839 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g06145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22856 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g55510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56373 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07500 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g18689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05211 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g28039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23858 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0030991 intraciliary transport particle A IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!