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  5. Cba_g45098

Cba_g45098 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : transcriptional co-regulator *(ZPR) & original description: none


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g45098
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Adi_g130173 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39406 PHB-1D, ATHB-14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05567 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40272.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G076100.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G020900.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G068400.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g12681 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20524 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31340 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os03g01890.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
LOC_Os12g41860.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Lfl_g26487 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436137g0010 ICU4, ATHB15,... Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g24140.1 HB-8, ATHB8, ATHB-8 transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Msp_g26097 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003695 PHB-1D, ATHB-14,... not classified & original description: CDS=3209-3661 0.03 OrthoFinder output from all 47 species
Sam_g12564 No alias HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo270954 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Spa_g05254 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e003226_P004 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e004553_P004 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e018118_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e039093_P002 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR013978 MEKHLA 701 842
IPR001356 Homeobox_dom 34 92
IPR002913 START_lipid-bd_dom 178 384
No external refs found!