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  5. Cba_g43512

Cba_g43512


Description : not classified & original description: none


Gene families : OG0002954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g43512
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Aob_g21476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g53042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51826 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0018580 nitronate monooxygenase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!