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  5. Cba_g43029

Cba_g43029 (AtRABG3d, RABG3d)


Aliases : AtRABG3d, RABG3d

Description : G-class RAB GTPase & original description: none


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g43029
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Als_g20926 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18004 ATRABG2, ATRAB7A, RAB7A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22987 ATRABG3B,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49977 ATRABG3B,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022246001 ATRABG3A, RABG3A Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
LOC_Os05g44050.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Len_g27856 ATRABG3B,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Msp_g11025 ATRABG3B,... G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19288 ATRABG2, ATRAB7A, RAB7A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53336 AtRABG1, RABG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55417 ATRABG2, ATRAB7A, RAB7A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc01g109520.3.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g21415 ATRABG3B,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55684 ATRABG2, ATRAB7A, RAB7A not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g23375 ATRABG2, ATRAB7A, RAB7A not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 20 186
No external refs found!