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  5. Lfl_g34966

Lfl_g34966 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34966

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 CAMTA3, SR1,... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
AT2G22300 CAMTA3, SR1 signal responsive 1 0.03 OrthoFinder output from all 47 species
Adi_g016712 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085085 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13747 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07423 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22501 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55577.t1 Aspi01Gene55577 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55581.t1 Aspi01Gene55581 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36827 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G055700.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01010510001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species
Gb_04014 No alias transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
Gb_11889 CAMTA3, SR1 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g69910.1 LOC_Os01g69910 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
LOC_Os03g27080.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.05 OrthoFinder output from all 47 species
LOC_Os04g31900.1 LOC_Os04g31900 transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g03150.1 CAMTA3, SR1 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Nbi_g22018 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35915 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10937 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01380 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013495 No alias CAMTA-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g07183 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo441667 CAMTA3, SR1 RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species
Solyc01g105230.4.1 Solyc01g105230 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Solyc04g056270.4.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Zm00001e002794_P002 CAMTA3, SR1,... transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
Zm00001e012888_P005 CAMTA3, SR1,... transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
Zm00001e037974_P002 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002909 IPT_dom 460 544
IPR005559 CG-1_dom 23 135
IPR002110 Ankyrin_rpt 662 751
IPR000048 IQ_motif_EF-hand-BS 868 885
IPR000048 IQ_motif_EF-hand-BS 892 907
No external refs found!