1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g34904

Lfl_g34904 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : not classified & original description: none


Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34904

Target Alias Description ECC score Gene Family Method Actions
Aev_g19734 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07518 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19316 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03808 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56803.t1 Aspi01Gene56803 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26743 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G017400.1 PDS3, PDS,... not classified & original description: pacid=50621794... 0.07 OrthoFinder output from all 47 species
Ceric.25G032300.1 Ceric.25G032300 not classified & original description: pacid=50594452... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.47 TZ, THI4, THI1 No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001302.9 PDE181, ZDS, SPC1 No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.03 OrthoFinder output from all 47 species
Cre13.g587500 No alias Phytoene dehydrogenase, chloroplastic/chromoplastic... 0.04 OrthoFinder output from all 47 species
Dac_g13672 PDS3, PDS, PDE226 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g09245 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g24435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01530 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023990001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g13429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428599g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_580945g0010 LDL3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g18160.1 PDS3, PDS, PDE226 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g10094 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03292 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56449 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo74261 PDS3, PDS, PDE226 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.05 OrthoFinder output from all 47 species
Spa_g54354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13831 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 62 502
No external refs found!