Cba_g39107


Description : component *(ACINUS) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0001433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001433_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g39107

Target Alias Description ECC score Gene Family Method Actions
Adi_g017411 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Adi_g059772 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ala_g02544 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ala_g16232 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Als_g06643 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
Als_g12459 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Als_g27768 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Als_g39202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07390 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010562 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cba_g39106 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Ceric.13G077200.1 Ceric.13G077200 component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dac_g10594 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dac_g11157 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Dcu_g09840 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Dcu_g39092 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Dcu_g42746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19978 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Len_g24712 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.05 OrthoFinder output from all 47 species
Lfl_g34375 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
MA_7197g0010 No alias component ACINUS of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Mp2g15000.1 No alias component ACINUS of RNA quality control Exon Junction complex 0.01 OrthoFinder output from all 47 species
Pir_g04495 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Ppi_g08232 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Ppi_g42834 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Solyc04g072670.4.1 Solyc04g072670 component ACINUS of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Tin_g05227 No alias component *(ACINUS) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
Zm00001e037964_P002 Zm00001e037964 component ACINUS of RNA quality control Exon Junction complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032552 RSB_motif 856 901
IPR003034 SAP_dom 13 47
No external refs found!