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  5. Cba_g39034

Cba_g39034 (LOF2, MYB105, ATMYB105)


Aliases : LOF2, MYB105, ATMYB105

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g39034

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00076220 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.03 OrthoFinder output from all 47 species
AT2G23290 MYB70, AtMYB70 myb domain protein 70 0.03 OrthoFinder output from all 47 species
AT3G50060 MYB77 myb domain protein 77 0.04 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.03 OrthoFinder output from all 47 species
Aev_g01523 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ala_g04741 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0179.g056264 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0629.g080127 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s3609.g116385 MYB73, ATMYB73 not classified & original description: CDS=1-897 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.38 PGA37, ATMYB118, MYB118 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Cre16.g677382 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dac_g00932 MYB1, AtMYB1 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.05 OrthoFinder output from all 47 species
Ehy_g05817 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000219001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g51110.1 BW52, ATMYB52,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g33800.1 LOF2, MYB105,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Lfl_g01931 AtMYB109, MYB109 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Msp_g26462 AtMYB98, MYB98 MYB class-R2R3 transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g26012 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Pnu_g24579 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000153 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Smo99462 MYB70, AtMYB70 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g064540.4.1 BW52, ATMYB52,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g16125 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Spa_g41684 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Zm00001e013910_P001 MYB77, Zm00001e013910 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e030480_P001 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e037510_P001 MYBR1, MYB44,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA

No InterPro domains available for this sequence

No external refs found!