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  5. Cba_g39033

Cba_g39033


Description : not classified & original description: none


Gene families : OG0001449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g39033

Target Alias Description ECC score Gene Family Method Actions
Dcu_g16617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001130 No alias not classified & original description: CDS=703-1365 0.02 OrthoFinder output from all 47 species
Zm00001e025140_P002 Zm00001e025140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR018639 DUF2062 72 204
No external refs found!