1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g38524

Cba_g38524


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38524

Target Alias Description ECC score Gene Family Method Actions
Adi_g015266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g65712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G003300.1 Ceric.08G003300 not classified & original description: pacid=50638706... 0.05 OrthoFinder output from all 47 species
Ceric.09G067900.1 Ceric.09G067900 not classified & original description: pacid=50588290... 0.05 OrthoFinder output from all 47 species
Ceric.12G065400.1 Ceric.12G065400 not classified & original description: pacid=50601520... 0.04 OrthoFinder output from all 47 species
Ceric.13G059700.1 Ceric.13G059700 not classified & original description: pacid=50635257... 0.03 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.04 OrthoFinder output from all 47 species
Dac_g08942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46611 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008983 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0295.g027183 No alias not classified & original description: CDS=1-1983 0.02 OrthoFinder output from all 47 species
Spa_g08270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01169 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g08689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 164
IPR002885 Pentatricopeptide_repeat 186 235
IPR002885 Pentatricopeptide_repeat 395 444
IPR002885 Pentatricopeptide_repeat 465 512
IPR002885 Pentatricopeptide_repeat 288 318
IPR002885 Pentatricopeptide_repeat 321 352
IPR002885 Pentatricopeptide_repeat 252 283
IPR002885 Pentatricopeptide_repeat 363 392
IPR002885 Pentatricopeptide_repeat 85 114
No external refs found!