Aliases : ATRAC11, ARAC11, ROP1, ROP1AT, ATROP1
Description : small GTPase *(ROP) & original description: none
Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cba_g38441 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g003765 | ARAC3, RAC3,... | small GTPase *(ROP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g23892 | ATRAC11, ARAC11,... | small GTPase *(ROP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g06146 | ARAC3, RAC3,... | small GTPase *(ROP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g03585 | ATRAC11, ARAC11,... | small GTPase *(ROP) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dde_g20297 | ARAC3, RAC3,... | small GTPase *(ROP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018729001 | ATRAC1, ROP3,... | Multi-process regulation.Rop GTPase regulatory... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01021145001 | ARAC2, RAC2,... | Multi-process regulation.Rop GTPase regulatory... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g50860.1 | ATRAC8, ATROP10,... | small GTPase (ROP) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g43820.1 | ARAC7, ROP9,... | small GTPase (ROP) | 0.03 | OrthoFinder output from all 47 species | |
MA_10426447g0010 | ATRAC4, ARAC4,... | small GTPase (ROP) | 0.03 | OrthoFinder output from all 47 species | |
MA_36432g0010 | ARAC3, RAC3,... | small GTPase (ROP) | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0111.g020708 | ARAC3, RAC3,... | small GTPase *(ROP) & original description: CDS=388-1065 | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g077400.4.1 | ARAC2, RAC2,... | small GTPase (ROP) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g29989 | ATRAC11, ARAC11,... | small GTPase *(ROP) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05437 | ATRAC11, ARAC11,... | small GTPase *(ROP) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g05440 | ATRAC11, ARAC11,... | small GTPase *(ROP) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e032127_P001 | ARAC7, ROP9,... | small GTPase (ROP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036080_P001 | ATRAC8, ATROP10,... | small GTPase (ROP) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 8 | 178 |
No external refs found! |