Gb_01588


Description : Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana (sp|q9smz2|pp347_arath : 630.0)


Gene families : OG_01_0020632 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0020265 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0019431 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01588
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
MA_45324g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.11 Archaeplastida
MA_45324g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 LandPlants
MA_45324g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 810 934
IPR002885 Pentatricopeptide_repeat 487 534
IPR002885 Pentatricopeptide_repeat 637 684
IPR002885 Pentatricopeptide_repeat 259 307
IPR002885 Pentatricopeptide_repeat 128 175
IPR002885 Pentatricopeptide_repeat 386 433
IPR002885 Pentatricopeptide_repeat 562 588
IPR002885 Pentatricopeptide_repeat 200 230
IPR002885 Pentatricopeptide_repeat 335 362
IPR002885 Pentatricopeptide_repeat 711 736
IPR002885 Pentatricopeptide_repeat 777 806
IPR002885 Pentatricopeptide_repeat 231 257
No external refs found!