1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g34505

Lfl_g34505 (SMG7)


Aliases : SMG7

Description : not classified & original description: none


Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34505

Target Alias Description ECC score Gene Family Method Actions
Als_g15194 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.02 OrthoFinder output from all 47 species
Ore_g18215 SMG7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04357 SMG7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR018834 DNA/RNA-bd_Est1-type 268 577
IPR019458 Est1-like_N 131 255
No external refs found!