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  5. Cba_g38223

Cba_g38223 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38223

Target Alias Description ECC score Gene Family Method Actions
Ala_g05126 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aob_g01893 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aop_g11414 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Ceric.16G043500.1 COI1, Ceric.16G043500 not classified & original description: pacid=50590078... 0.04 OrthoFinder output from all 47 species
Ceric.34G010500.1 AFB2, Ceric.34G010500 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
LOC_Os03g15880.4 COI1, LOC_Os03g15880 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
MA_15842g0020 TIR1 Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sam_g05124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49637 No alias component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Spa_g06750 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.06 OrthoFinder output from all 47 species
Zm00001e028730_P001 COI1, Zm00001e028730 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 68 114
IPR041567 COI1_F-box 10 48
No external refs found!