1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g38037

Cba_g38037 (ECT8)


Aliases : ECT8

Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38037

Target Alias Description ECC score Gene Family Method Actions
AT5G61020 ECT3 evolutionarily conserved C-terminal region 3 0.03 OrthoFinder output from all 47 species
Adi_g076980 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114840 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11394 ECT5 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12419 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12670 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36173 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06040 ECT5 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g18337 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19226 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048890 ECT5 methylation reader *(ECT) & original description: CDS=358-1521 0.03 OrthoFinder output from all 47 species
Ceric.19G077700.1 ECT7, Ceric.19G077700 methylation reader *(ECT) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g23395 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20189 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07823 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033395001 ECT2 No description available 0.03 OrthoFinder output from all 47 species
Gb_17619 ECT2 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
LOC_Os03g06240.1 ECT4, LOC_Os03g06240 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Len_g18900 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23805 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55797 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02026 ECT8 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429321g0010 ECT7 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species
MA_10435373g0010 ECT8 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Mp1g00140.1 ECT5 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Nbi_g03142 ECT7 methylation reader *(ECT) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09604 ECT3 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20211 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03151 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g028860.3.1 ECT2, Solyc01g028860 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Solyc01g103540.3.1 ECT11, Solyc01g103540 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species
Solyc05g032850.3.1 ECT5, Solyc05g032850 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12619 ECT5 methylation reader *(ECT) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46273 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03520 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11555 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011469_P004 ECT4, Zm00001e011469 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Zm00001e021892_P001 ECT7, Zm00001e021892 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Zm00001e039003_P004 ECT2, Zm00001e039003 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 366 508
No external refs found!