MA_185098g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein embryo defective 2261 (EMB2261)


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_185098g0010
Cluster HCCA cluster: Cluster_458

Target Alias Description ECC score Gene Family Method Actions
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G05240 MEF19 mitochondrial editing factor 19 0.03 Gene family
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Gene family
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT5G47460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT5G56310 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 Gene family
GSVIVT01000086001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01000420001 No alias No description available 0.03 Gene family
GSVIVT01000968001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01007645001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01008173001 No alias No description available 0.03 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01011501001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01011735001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01012159001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01015087001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01015466001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01016860001 No alias No description available 0.05 Gene family
GSVIVT01018597001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01022230001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01023860001 No alias No description available 0.03 Gene family
GSVIVT01024493001 No alias No description available 0.02 Gene family
GSVIVT01024870001 No alias No description available 0.03 Gene family
GSVIVT01024912001 No alias No description available 0.03 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01031265001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01032994001 No alias No description available 0.02 Gene family
GSVIVT01033004001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01033304001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01033837001 No alias No description available 0.03 Gene family
GSVIVT01037332001 No alias No description available 0.05 Gene family
GSVIVT01037562001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.03 Gene family
LOC_Os01g19380 Os01g0299150,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os03g56850 Os03g0781100 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os05g30710 Os05g0370000 No description available 0.04 Gene family
LOC_Os06g02200 Os06g0112000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.02 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.04 Gene family
LOC_Os09g38310 Os09g0555400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os11g01836 Os11g0109600 No description available 0.05 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.02 Gene family
MA_10429043g0020 No alias No description available 0.02 Gene family
MA_105629g0010 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.11 Gene family
MA_107356g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_1109g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
MA_16226g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_177435g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_18165g0010 No alias No description available 0.02 Gene family
MA_18383g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_20599g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
MA_20899g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_210823g0010 No alias No description available 0.04 Gene family
MA_252238g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_27147g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_2991g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_32723g0010 No alias No description available 0.07 Gene family
MA_39595g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
MA_57048g0010 No alias No description available 0.02 Gene family
MA_67032g0010 No alias No description available 0.03 Gene family
MA_745151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_81436g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_9526611g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo47998 PACid_15423210 No description available 0.01 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.05 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.03 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc02g079380.2.1 Solyc02g079380.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc03g063160.1.1 Solyc03g063160.1 No description available 0.05 Gene family
Solyc03g093630.2.1 Solyc03g093630.2 No description available 0.04 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.04 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.03 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc06g066080.1.1 Solyc06g066080.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.03 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc08g023640.1.1 Solyc08g023640.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc08g078570.2.1 Solyc08g078570.2 No description available 0.02 Gene family
Solyc09g009950.3.1 Solyc09g009950.3 No description available 0.04 Gene family
Solyc09g065710.1.1 Solyc09g065710.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.05 Gene family
Solyc11g007230.1.1 Solyc11g007230.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc11g008970.1.1 Solyc11g008970.1 No description available 0.05 Gene family
Solyc11g067210.1.1 Solyc11g067210.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.02 Gene family
Zm00001d003050 GRMZM2G331779 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d013136 GRMZM5G892151 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.03 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d034933 No alias No description available 0.08 Gene family
Zm00001d037891 No alias No description available 0.05 Gene family
Zm00001d039873 GRMZM2G380195 No description available 0.02 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.02 Gene family
Zm00001d052794 GRMZM2G140600 No description available 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 132
IPR002885 Pentatricopeptide_repeat 629 654
IPR002885 Pentatricopeptide_repeat 153 175
IPR002885 Pentatricopeptide_repeat 453 501
IPR002885 Pentatricopeptide_repeat 252 299
IPR002885 Pentatricopeptide_repeat 353 399
IPR002885 Pentatricopeptide_repeat 555 602
IPR032867 DYW_dom 728 852
No external refs found!