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Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none
Gene families : OG0007954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007954_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g36893 | |
| Cluster | HCCA: Cluster_288 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g18360 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.14 | OrthoFinder output from all 47 species | |
| Aop_g62345 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g68783 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g68784 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15046 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g35392 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g06004 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g23301 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g46381 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
| Len_g38133 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04457 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
| Msp_g11427 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.14 | OrthoFinder output from all 47 species | |
| Msp_g17648 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g25590 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g06955 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g06956 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004096 | catalase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |