Cba_g36827 (CAMTA3, SR1)

Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none

Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g36827

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00038p00173360	CAMTA3, SR1,...	RNA biosynthesis.transcriptional activation.CAMTA...	0.02	OrthoFinder output from all 47 species
Lfl_g34966	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g09186	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g07183	No alias	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g28422	No alias	CAMTA-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc04g056270.4.1	CAMTA3, SR1,...	transcription factor (CAMTA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000048	IQ_motif_EF-hand-BS	884	902
IPR000048	IQ_motif_EF-hand-BS	907	926
IPR000048	IQ_motif_EF-hand-BS	982	1001
IPR002110	Ankyrin_rpt	669	732
IPR002909	IPT_dom	464	549
IPR005559	CG-1_dom	28	141

External Links

No external refs found!