Cba_g36633

Description : associated component *(HDC1) of histone deacetylase machineries & original description: none

Gene families : OG0004198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004198_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g36633
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
Adi_g011656	No alias	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Aev_g05483	No alias	associated component *(HDC1) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Dcu_g03126	No alias	associated component *(HDC1) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Ehy_g07857	No alias	associated component *(HDC1) of histone deacetylase...	0.04	OrthoFinder output from all 47 species
Lfl_g10369	No alias	associated component *(HDC1) of histone deacetylase...	0.02	OrthoFinder output from all 47 species
Ore_g06630	No alias	associated component *(HDC1) of histone deacetylase...	0.03	OrthoFinder output from all 47 species
Solyc05g056340.3.1	Solyc05g056340	associated component HDC1/Rxt3 of histone deacetylase machineries	0.02	OrthoFinder output from all 47 species
Spa_g08092	No alias	associated component *(HDC1) of histone deacetylase...	0.04	OrthoFinder output from all 47 species
Spa_g15395	No alias	associated component *(HDC1) of histone deacetylase...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006476	protein deacetylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016575	histone deacetylation	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0035601	protein deacylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098732	macromolecule deacylation	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013951	Rxt3	550	592

External Links

No external refs found!