1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g36080

Cba_g36080 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : phytoene desaturase *(PDS) & original description: none


Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g36080

Target Alias Description ECC score Gene Family Method Actions
AT4G14210 PDS3, PDS, PDE226 phytoene desaturase 3 0.04 OrthoFinder output from all 47 species
Aev_g13760 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09707 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g01360 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08410.t1 PDS3, PDS,... phytoene desaturase *(PDS) & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0047.g030344 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: CDS=138-1889 0.03 OrthoFinder output from all 47 species
Ceric.08G066500.1 PDS3, PDS,... phytoene desaturase *(PDS) & original description:... 0.04 OrthoFinder output from all 47 species
Cre12.g509650 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.06 OrthoFinder output from all 47 species
Dac_g11776 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09650 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g01859 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.06 OrthoFinder output from all 47 species
Mp8g14330.1 PDS3, PDS, PDE226 phytoene desaturase (PDS) 0.03 OrthoFinder output from all 47 species
Pir_g10268 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17790 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.07 OrthoFinder output from all 47 species
Smo232430 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.09 OrthoFinder output from all 47 species
Spa_g01539 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000618_P002 PDS3, PDS,... phytoene desaturase (PDS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 107 548
No external refs found!