Cba_g35056


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g35056

Target Alias Description ECC score Gene Family Method Actions
Adi_g003810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051856 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053729 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03970 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g26985 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03817 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18405 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61599 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10587.t1 CRR2, Aspi01Gene10587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25447.t1 Aspi01Gene25447 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26812.t1 Aspi01Gene26812 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33635.t1 Aspi01Gene33635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34523.t1 Aspi01Gene34523 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009330 REME1 not classified & original description: CDS=41-1351 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.04 OrthoFinder output from all 47 species
Cba_g15829 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G077500.1 Ceric.22G077500 not classified & original description: pacid=50615168... 0.04 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33204 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38506 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g03278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05389 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25473 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g05393 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34233 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03155 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03488 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20888 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14956 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18893 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32640 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55534 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004758 No alias not classified & original description: CDS=1-2223 0.02 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo429215 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Smo442088 CRR22 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
Smo84746 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Spa_g07054 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08793 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42246 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29126 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Zm00001e014800_P001 OTP82, Zm00001e014800 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e030831_P001 Zm00001e030831 Pentatricopeptide repeat-containing protein At3g20730... 0.02 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 61 109
IPR002885 Pentatricopeptide_repeat 138 159
IPR002885 Pentatricopeptide_repeat 167 193
IPR002885 Pentatricopeptide_repeat 36 58
No external refs found!