Cba_g35045


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g35045

Target Alias Description ECC score Gene Family Method Actions
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g012462 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16630 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19144 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55228 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008858 No alias not classified & original description: CDS=1-2760 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009689 No alias not classified & original description: CDS=1-2529 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043166 No alias not classified & original description: CDS=1-1980 0.03 OrthoFinder output from all 47 species
Azfi_s0283.g063049 OTP86 ssDNA-binding protein *(OSB) & original description: CDS=1-2283 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G043000.1 Ceric.03G043000 not classified & original description: pacid=50572819... 0.02 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.02 OrthoFinder output from all 47 species
Ceric.09G084300.1 Ceric.09G084300 not classified & original description: pacid=50586761... 0.03 OrthoFinder output from all 47 species
Ceric.11G086200.1 OTP84, Ceric.11G086200 not classified & original description: pacid=50595902... 0.02 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.02 OrthoFinder output from all 47 species
Ceric.14G067900.1 CRR22, Ceric.14G067900 not classified & original description: pacid=50634625... 0.02 OrthoFinder output from all 47 species
Ceric.1Z148300.1 Ceric.1Z148300 not classified & original description: pacid=50637132... 0.03 OrthoFinder output from all 47 species
Ceric.21G042400.1 Ceric.21G042400 not classified & original description: pacid=50602832... 0.03 OrthoFinder output from all 47 species
Ceric.22G079200.1 OTP84, Ceric.22G079200 not classified & original description: pacid=50615391... 0.04 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.03 OrthoFinder output from all 47 species
Ceric.28G059600.1 OTP84, Ceric.28G059600 not classified & original description: pacid=50569965... 0.03 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.04 OrthoFinder output from all 47 species
Ceric.34G039200.1 Ceric.34G039200 not classified & original description: pacid=50623691... 0.03 OrthoFinder output from all 47 species
Ceric.36G059200.1 OTP86, Ceric.36G059200 not classified & original description: pacid=50568280... 0.03 OrthoFinder output from all 47 species
Ceric.39G035400.1 Ceric.39G035400 not classified & original description: pacid=50583580... 0.04 OrthoFinder output from all 47 species
Dcu_g17220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43120 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18216 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Nbi_g03746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18545 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07329 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11413 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14870 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02677 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010805 VAC1, ECB2, ATECB2 not classified & original description: CDS=294-2756 0.02 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo134538 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30384 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04172 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17628 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 58 104
IPR002885 Pentatricopeptide_repeat 131 155
IPR002885 Pentatricopeptide_repeat 31 53
No external refs found!