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  5. Cba_g35007

Cba_g35007 (CHMP1A, VPS46.2)


Aliases : CHMP1A, VPS46.2

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: none


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g35007
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0006.g009683 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Solyc06g062510.3.1 CHMP1B, VPS46.1,... VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 39 157
No external refs found!