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  5. Cba_g34890

Cba_g34890


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g34890
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Adi_g024716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08080 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g18486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19037 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04899 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17251 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.05 OrthoFinder output from all 47 species
Azfi_s0063.g035389 No alias not classified & original description: CDS=1-2073 0.05 OrthoFinder output from all 47 species
Azfi_s0093.g043186 No alias not classified & original description: CDS=1-3252 0.05 OrthoFinder output from all 47 species
Azfi_s0129.g048955 No alias not classified & original description: CDS=1-1935 0.05 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.06 OrthoFinder output from all 47 species
Azfi_s0229.g059123 No alias not classified & original description: CDS=1-2415 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059819 No alias not classified & original description: CDS=1-2853 0.05 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.07 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.06 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.07 OrthoFinder output from all 47 species
Azfi_s0551.g076611 No alias not classified & original description: CDS=1-2037 0.05 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.07 OrthoFinder output from all 47 species
Azfi_s2487.g111794 No alias not classified & original description: CDS=200-2266 0.05 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23174 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29993 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g30010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67235 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67893 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G072000.1 Ceric.02G072000 not classified & original description: pacid=50584704... 0.04 OrthoFinder output from all 47 species
Ceric.08G045700.1 Ceric.08G045700 not classified & original description: pacid=50638513... 0.04 OrthoFinder output from all 47 species
Ceric.11G019200.1 Ceric.11G019200 not classified & original description: pacid=50596467... 0.04 OrthoFinder output from all 47 species
Ceric.13G012100.1 VAC1, ECB2,... not classified & original description: pacid=50635600... 0.04 OrthoFinder output from all 47 species
Ceric.15G051000.1 Ceric.15G051000 not classified & original description: pacid=50640878... 0.05 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.05 OrthoFinder output from all 47 species
Ceric.21G089400.1 Ceric.21G089400 not classified & original description: pacid=50603367... 0.04 OrthoFinder output from all 47 species
Ceric.23G026100.1 Ceric.23G026100 not classified & original description: pacid=50611257... 0.04 OrthoFinder output from all 47 species
Ceric.25G039100.1 Ceric.25G039100 not classified & original description: pacid=50593222... 0.04 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.05 OrthoFinder output from all 47 species
Ceric.27G014200.1 Ceric.27G014200 not classified & original description: pacid=50605189... 0.04 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.04 OrthoFinder output from all 47 species
Ceric.34G015500.1 OTP84, Ceric.34G015500 not classified & original description: pacid=50623596... 0.06 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.06 OrthoFinder output from all 47 species
Dac_g07110 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21308 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23967 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g43569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13073 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g14510 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g15386 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18052 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g21885 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05014 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12223 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01227 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06113 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g11632 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g21288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22932 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23334 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07034 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17403 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005759 No alias not classified & original description: CDS=1-3063 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009977 No alias not classified & original description: CDS=1-2472 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013724 No alias not classified & original description: CDS=1-1671 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020807 No alias not classified & original description: CDS=1-3252 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022524 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56966 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06050 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 230 250
IPR002885 Pentatricopeptide_repeat 375 400
IPR002885 Pentatricopeptide_repeat 347 373
IPR002885 Pentatricopeptide_repeat 22 64
IPR002885 Pentatricopeptide_repeat 139 185
IPR002885 Pentatricopeptide_repeat 256 302
No external refs found!