Cba_g34642 (AGO1)

Aliases : AGO1

Description : not classified & original description: none

Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g34642
Cluster	HCCA: Cluster_274

Target	Alias	Description	ECC score	Gene Family Method
AT1G48410	AGO1	Stabilizer of iron transporter SufD / Polynucleotidyl transferase	0.03	OrthoFinder output from all 47 species
Adi_g061053	AGO1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g11029	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.02	OrthoFinder output from all 47 species
LOC_Os06g51310.2	AGO1, LOC_Os06g51310	RIS-Complex miRNA recruiting factor (AGO1)	0.02	OrthoFinder output from all 47 species
Msp_g13472	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.02	OrthoFinder output from all 47 species
Pp3c17_350V3.1	AGO1, Pp3c17_350	Stabilizer of iron transporter SufD / Polynucleotidyl transferase	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032472	ArgoL2	439	473
IPR032474	Argonaute_N	88	219
IPR003100	PAZ_dom	315	416
IPR032473	Argonaute_Mid_dom	482	559
IPR003165	Piwi	573	905
IPR014811	ArgoL1	231	278

External Links

No external refs found!