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  5. Cba_g34640

Cba_g34640 (EIR1, WAV6, ATPIN2,...)


Aliases : EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g34640

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Sam_g36015 No alias auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g007690.3.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 745
No external refs found!