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Aliases : LHCB4.1
Description : component *(LHCb4) of LHC-II complex & original description: none
Gene families : OG0003968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003968_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00239610 | LHCB4.2,... | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G08940 | LHCB4.2 | light harvesting complex photosystem II | 0.03 | OrthoFinder output from all 47 species | |
| AT5G01530 | LHCB4.1 | light harvesting complex photosystem II | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g047687 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g079332 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11240 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g08280 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g39718 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05395 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05396 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0173.g055756 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g11090 | No alias | component *(LHCb4) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G075200.1 | LHCB4.2, Ceric.05G075200 | component *(LHCb4) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G069400.1 | LHCB4.1, Ceric.22G069400 | component *(LHCb4) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cre17.g720250 | LHCB4.3 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23809 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45560 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g49585 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10605 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g03348 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21710 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g37240.1 | LHCB4.1, LOC_Os07g37240 | component LHCb4 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g31128 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Len_g34078 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_129206g0010 | LHCB4.2 | component LHCb4 of LHC-II complex | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g16850.1 | LHCB4.1 | component LHCb4 of LHC-II complex | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g07941 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g01855 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g15460 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g33035 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g15010 | LHCB4.2 | component *(LHCb4) of LHC-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Smo149722 | LHCB4.2 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g014520.3.1 | LHCB4.1, Solyc09g014520 | component LHCb4 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08357 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g50929 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g50930 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50931 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g08576 | LHCB4.1 | component *(LHCb4) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e010547_P001 | LHCB4.1, Zm00001e010547 | component LHCb4 of LHC-II complex | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e035235_P001 | LHCB4.1, Zm00001e035235 | component LHCb4 of LHC-II complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008172 | S-methyltransferase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 69 | 266 |
| No external refs found! |