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Cba_g34507 (RPS18A, PFL, PFL1)


Aliases : RPS18A, PFL, PFL1

Description : component *(uS13) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g34507

Target Alias Description ECC score Gene Family Method Actions
AT1G22780 RPS18A, PFL, PFL1 Ribosomal protein S13/S18 family 0.03 OrthoFinder output from all 47 species
AT4G09800 RPS18C S18 ribosomal protein 0.03 OrthoFinder output from all 47 species
Ceric.25G059000.1 RPS18A, PFL,... component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre06.g272950 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g07903 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58050.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os07g07709.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp1g07420.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pir_g53871 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c6_21770V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.02 OrthoFinder output from all 47 species
Sam_g11517 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc03g078290.3.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc06g073370.4.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc11g005680.2.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.05 OrthoFinder output from all 47 species
Spa_g10602 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g40316 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e005967_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e011880_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 22 150
No external refs found!