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Description : ndhA-specific mRNA splicing factor & original description: none
Gene families : OG0007004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g34115 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g19823 | No alias | plastidial RNA processing factor *(PPR287) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26348 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g09698 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s2070.g108974 | No alias | not classified & original description: CDS=84-746 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11391 | No alias | plastidial RNA processing factor *(PPR287) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03779 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012065001 | No alias | Photosynthesis.photophosphorylation.chlororespiration.NAD... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35563 | No alias | ndhA-specific mRNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g07360.1 | LOC_Os02g07360 | ndhA-specific mRNA splicing factor. plastidial RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15159 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05985 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17511 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25675 | No alias | ndhA-specific mRNA splicing factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g068760.4.1 | Solyc02g068760 | ndhA-specific mRNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07815 | No alias | plastidial RNA processing factor *(PPR287) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013734_P002 | Zm00001e013734 | ndhA-specific mRNA splicing factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |