Lfl_g34084


Description : component *(uS4) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000517 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34084

Target Alias Description ECC score Gene Family Method Actions
Adi_g003198 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 39 species
Adi_g003929 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g005179 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g007076 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species
Adi_g007077 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g048381 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g051035 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 39 species
Adi_g064793 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g064894 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g077201 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g089414 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g089415 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Adi_g089416 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g099553 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Adi_g112369 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g113924 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Adi_g118410 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Adi_g119916 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g128968 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Adi_g129774 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ala_g20884 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Als_g44422 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Als_g55434 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Aob_g08156 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Azfi_s2163.g109715 No alias not classified & original description: CDS=1-405 0.02 OrthoFinder output from all 39 species
Cba_g22489 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Cba_g26988 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Cba_g73535 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Cba_g73843 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Dcu_g18080 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Msp_g25633 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Msp_g48645 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 39 species
Nbi_g30849 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Pir_g65875 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Ppi_g05462 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g10901 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g16177 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g54511 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Ppi_g58198 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 39 species
Ppi_g61354 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Ppi_g63578 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!