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  5. Cba_g33749

Cba_g33749


Description : not classified & original description: none


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g33749

Target Alias Description ECC score Gene Family Method Actions
Ceric.06G015600.1 Ceric.06G015600 not classified & original description: pacid=50620151... 0.04 OrthoFinder output from all 47 species
Ceric.20G077000.1 Ceric.20G077000 not classified & original description: pacid=50565979... 0.02 OrthoFinder output from all 47 species
Cre03.g171650 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g08746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034780001 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g02884.1 LOC_Os01g02884 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g47532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016669 No alias not classified & original description: CDS=25-1776 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024829 No alias not classified & original description: CDS=1-315 0.03 OrthoFinder output from all 47 species
Sam_g08954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g006970.4.1 Solyc01g006970 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g26916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008090_P002 Zm00001e008090 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 562 693
IPR007502 Helicase-assoc_dom 757 830
IPR014720 dsRBD_dom 1093 1153
IPR011545 DEAD/DEAH_box_helicase_dom 300 456
IPR011709 DEAD-box_helicase_OB_fold 913 991
No external refs found!