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  5. Cba_g33097

Cba_g33097 (OPT4, ATOPT4)


Aliases : OPT4, ATOPT4

Description : oligopeptide transporter *(OPT) & original description: none


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g33097
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00190940 OPT1, ATOPT1,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
Aev_g18558 OPT3, ATOPT3 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08303 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07695 ATOPT2, OPT2 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34907 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_541g0010 OPT3, ATOPT3 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Mp4g06980.1 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species
Solyc03g082700.4.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 45 704
No external refs found!