Cba_g32789

Description : sporopollenin precursor exporter *(ABCG26) & original description: none

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g32789
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AT3G25620	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
Als_g27548	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Gb_31556	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Len_g57983	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_10101g0010	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_427512g0010	ABCG14	ABC transporter G family member 27 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013631	No alias	subfamily ABCG transporter & original description: CDS=1-2199	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	313	372
IPR013525	ABC_2_trans	449	657
IPR003439	ABC_transporter-like_ATP-bd	134	284

External Links

No external refs found!