1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00031p00234160

AMTR_s00031p00234160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00031.112

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein


Gene families : OG_01_0000369 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000369_tree ,
OG_02_0000606 (LandPlants) Phylogenetic Tree(s): OG_02_0000606_tree ,
OG_03_0001299 (SeedPlants) Phylogenetic Tree(s): OG_03_0001299_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00031p00234160
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g01740.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Pp3c20_7060V3.1 No alias ENTH/VHS/GAT family protein 0.02 Archaeplastida
Solyc03g097070.3.1 No alias TOM endomembrane trafficking associated protein 0.05 Archaeplastida
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
Solyc09g025240.3.1 No alias TOM endomembrane trafficking associated protein 0.05 Archaeplastida
Zm00001e015516_P001 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Zm00001e021369_P002 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Zm00001e023285_P001 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
Pp3c20_7060V3.1 No alias ENTH/VHS/GAT family protein 0.02 LandPlants
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.04 LandPlants
Zm00001e021369_P002 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
Zm00001e031902_P001 No alias TOM endomembrane trafficking associated protein 0.02 LandPlants
LOC_Os01g12880.1 No alias TOM endomembrane trafficking associated protein 0.01 SeedPlants
MA_12709g0010 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.03 SeedPlants
Zm00001e021369_P002 No alias TOM endomembrane trafficking associated protein 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002014 VHS_dom 4 134
IPR004152 GAT_dom 186 271
No external refs found!