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  5. Cba_g32236

Cba_g32236


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g32236
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Adi_g010431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113666 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ala_g36011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15707 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ceric.14G036300.1 Ceric.14G036300 component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ceric.15G055300.1 Ceric.15G055300 component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ceric.22G058100.1 Ceric.22G058100 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ceric.30G069800.1 Ceric.30G069800 not classified & original description: pacid=50608596... 0.03 OrthoFinder output from all 47 species
Dac_g16415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02986 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Dcu_g48948 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ehy_g25014 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Nbi_g26375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07133 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Ore_g18918 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ppi_g17469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011548 No alias not classified & original description: CDS=1-762 0.04 OrthoFinder output from all 47 species
Smo444137 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g29122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 155 202
No external refs found!