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  5. Cba_g32002

Cba_g32002


Description : not classified & original description: none


Gene families : OG0000108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g32002
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Adi_g010035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24196 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g25347 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33247 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g39275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39287 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00251.t1 Aspi01Gene00251 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05474.t1 Aspi01Gene05474 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06131.t1 CRK8, Aspi01Gene06131 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11064.t1 Aspi01Gene11064 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11324.t1 Aspi01Gene11324 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14252.t1 Aspi01Gene14252 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15563.t1 Aspi01Gene15563 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16572.t1 Aspi01Gene16572 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17413.t1 Aspi01Gene17413 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21696.t1 Aspi01Gene21696 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26639.t1 Aspi01Gene26639 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31170.t1 Aspi01Gene31170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33198.t1 Aspi01Gene33198 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53905.t1 Aspi01Gene53905 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57060.t1 Aspi01Gene57060 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58730.t1 Aspi01Gene58730 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62101.t1 Aspi01Gene62101 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62901.t1 Aspi01Gene62901 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene67656.t1 Aspi01Gene67656 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72222.t1 Aspi01Gene72222 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G006300.1 Ceric.03G006300 not classified & original description: pacid=50572981... 0.02 OrthoFinder output from all 47 species
Ceric.09G023700.1 Ceric.09G023700 not classified & original description: pacid=50588221... 0.05 OrthoFinder output from all 47 species
Ceric.16G050300.1 Ceric.16G050300 not classified & original description: pacid=50590129... 0.05 OrthoFinder output from all 47 species
Ceric.1Z242700.1 Ceric.1Z242700 not classified & original description: pacid=50606340... 0.03 OrthoFinder output from all 47 species
Ceric.27G007300.1 Ceric.27G007300 not classified & original description: pacid=50605851... 0.04 OrthoFinder output from all 47 species
Ceric.34G055300.1 Ceric.34G055300 not classified & original description: pacid=50623124... 0.02 OrthoFinder output from all 47 species
Dcu_g12265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32862 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g33734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c22_1640V3.1 Pp3c22_1640 No annotation 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004338 No alias not classified & original description: CDS=1-861 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012783 No alias not classified & original description: CDS=1-189 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020329 No alias not classified & original description: CDS=1-375 0.03 OrthoFinder output from all 47 species
Sam_g10219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 453 513
IPR001584 Integrase_cat-core 526 622
IPR025314 DUF4219 13 38
IPR001878 Znf_CCHC 299 313
No external refs found!