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  5. Cba_g31946

Cba_g31946 (PFN1, PRF1)


Aliases : PFN1, PRF1

Description : profilin actin nucleation protein & original description: none


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g31946
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00160320 PFN3, PRF3,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AT2G19760 PFN1, PRF1 profilin 1 0.02 OrthoFinder output from all 47 species
Als_g40895 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14096 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G056300.1 PFN3, PRF3,... profilin actin nucleation protein & original... 0.04 OrthoFinder output from all 47 species
Dac_g06425 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015280001 PRF4 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
GSVIVT01016960001 PRF5 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_19630 PRF5 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g05880.1 PRF5, LOC_Os06g05880 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species
Len_g07662 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08402 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g13930.1 PRF5 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species
Nbi_g06064 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g33322 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36146 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26903 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23810 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012614 PFN3, PRF3 profilin actin nucleation protein & original... 0.03 OrthoFinder output from all 47 species
Solyc11g070130.2.1 PFN1, PRF1,... profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
Spa_g25576 PRF5 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g36566 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032207_P001 PRF4, Zm00001e032207 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species
Zm00001e036481_P001 PRF5, Zm00001e036481 profilin actin nucleation protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 62 193
No external refs found!