Aliases : HDA3, ATHD2A, HDT1, HD2A
Description : HD2-type histone deacetylase *(HD2/HDT) & original description: none
Gene families : OG0002165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002165_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g045241 | HDT3, HD2C | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g106676 | HDT3, HD2C | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g54155 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g15503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.33G031600.1 | HDA3, ATHD2A,... | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000983.33 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g11095 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g20303 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g10269 | HDA13, HDT04, HDT4 | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.02 | OrthoFinder output from all 47 species | |
Len_g17092 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g22573 | HDT3, HD2C | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.02 | OrthoFinder output from all 47 species | |
MA_3905g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g19073 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g06815 | HD2, HDA4, HD2B,... | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g34458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g009030.4.1 | HDA3, ATHD2A,... | histone deacetylase (HDT/HD2) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032246_P002 | HDA3, ATHD2A,... | histone deacetylase (HDT/HD2) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR041232 | NPL | 3 | 92 |
No external refs found! |