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  5. Cba_g30853

Cba_g30853


Description : not classified & original description: none


Gene families : OG0006414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g30853

Target Alias Description ECC score Gene Family Method Actions
AT5G10690 No alias pentatricopeptide (PPR) repeat-containing protein / CBS... 0.02 OrthoFinder output from all 47 species
Als_g01812 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 146 172
IPR000644 CBS_dom 515 543
IPR000644 CBS_dom 550 612
IPR002885 Pentatricopeptide_repeat 383 408
IPR002885 Pentatricopeptide_repeat 113 140
IPR002885 Pentatricopeptide_repeat 302 330
IPR002885 Pentatricopeptide_repeat 222 270
No external refs found!